@article {9524, title = {A benchmark for computational analysis of animal behavior, using animal-borne tags}, journal = {arXiv}, year = {2023}, month = {05/2023}, abstract = {Animal-borne sensors ({\textquoteleft}bio-loggers{\textquoteright}) can record a suite of kinematic and environmental data, which can elucidate animal ecophysiology and improve conservation efforts. Machine learning techniques are useful for interpreting the large amounts of data recorded by bio-loggers, but there exists no standard for comparing the different machine learning techniques in this domain. To address this, we present the Bio-logger Ethogram Benchmark (BEBE), a collection of datasets with behavioral annotations, standardized modeling tasks, and evaluation metrics. BEBE is to date the largest, most taxonomically diverse, publicly available benchmark of this type, and includes 1654 hours of data collected from 149 individuals across nine taxa. We evaluate the performance of ten different machine learning methods on BEBE, and identify key challenges to be addressed in future work. Datasets, models, and evaluation code are made publicly available at https://github.com/earthspecies/ BEBE, to enable community use of BEBE as a point of comparison in methods development.}, keywords = {Accelerometers, animal behavior, Bio-loggers, Clustering, Machine Learning, Time series}, author = {Benjamin Hoffman and Maddie Cusimano and Vittorio Baglione and Daniela Canestrari and Chevallier, Damien and Dominic L. DeSantis and Lor{\`e}ne Jeantet and Monique A. Ladds and Takuya Maekawa and Vicente Mata-Silva and V{\'\i}ctor Moreno-Gonz{\'a}lez and Eva Trapote and Outi Vainio and Antti Vehkaoja and Ken Yoda and Katherine Zacarian and Ari Friedlaender and Christian Rutz} } @article {8649, title = {Classification of underwater photogrammetry data for temperate benthic rocky reef mapping}, journal = {Estuarine, Coastal and Shelf Science}, volume = {270}, year = {2022}, month = {Jan-06-2022}, pages = {107833}, issn = {02727714}, doi = {10.1016/j.ecss.2022.107833}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0272771422000920}, author = {Ternon, Q. and Danet, V. and Thiriet, P. and Ysnel, F. and Eric Feunteun and Collin, A.} } @book {9059, title = {European Spatial Data for Coastal and Marine Remote SensingLocal Circalittoral Rocky Seascape Structuring Fish Community: Insights from a Photogrammetric Approach}, year = {2022}, pages = {229 - 234}, publisher = {Springer International Publishing}, organization = {Springer International Publishing}, address = {Cham}, abstract = {Fish face multiple environmental pressures acting as multiscale filters structuring the community [6]. Study of the effect of local (~100 m2) habitat components such as habitat architecture, substrate composition, and benthic community on fish community is still limited because of the technical difficulties to sample reliable descriptors of all these habitat components. Nevertheless, the effect of the 3D architecture, especially the complexity, has been highlighted to act as an important variable, locally structuring fish communities and leading to an increase in diversity (species richness and Shannon index) and quantity (total density and biomass) of fish [1]. Photogrammetry is extending to submarine environment and allows to produce very fine information of the architecture and substrate composition [5], as well as of the benthic community [4]. The influence of the different habitat components (i.e., architecture, substrate composition, and benthic community) on the structure of fish community is here investigated, as well as the interest of photogrammetry in comparison to visual observation (Fig. 1).}, keywords = {Architecture, Benthic community, Fish community, Photogrammetry, Seascape, Substrate composition}, isbn = {978-3-031-16212-1}, doi = {10.1007/978-3-031-16213-810.1007/978-3-031-16213-8_16}, url = {https://link.springer.com/10.1007/978-3-031-16213-8}, author = {Ternon, Quentin and Collin, Antoine and Feunteun, Eric and Ysnel, Fr{\'e}d{\'e}ric and Danet, Valentin and Guillaume, Manon and Thiriet, Pierre}, editor = {Niculescu, Simona} } @article {8458, title = {From taxonomic to functional dark diversity: Exploring the causes of potential biodiversity and its implications for conservation}, journal = {Journal of Applied Ecology}, volume = {59}, year = {2022}, month = {Jan-01-2022}, pages = {103 - 116}, issn = {0021-8901}, doi = {10.1111/jpe.v59.110.1111/1365-2664.14033}, url = {https://onlinelibrary.wiley.com/toc/13652664/59/1}, author = {Morel, Lo{\"\i}s and Jung, Vincent and Chollet, Simon and Fr{\'e}d{\'e}ric Ysnel and Barbe, Lou} } @article {8887, title = {Temporal characteristics of plankton indicators in coastal waters: High-frequency data from PlanktonScope}, journal = {Journal of Sea Research}, volume = {189}, year = {2022}, month = {Jan-11-2022}, pages = {102283}, abstract = {Plankton\ are excellent indicators of ecosystem status and fisheries because of their pivotal role in marine food webs and their core values in the integrated\ ecosystem assessment\ (IEA). Monitoring plankton is essential to understand their dynamics and underlying processes. Recent advances in imaging technologies have enabled in situ, high-frequency, real-time observations of plankton in coastal waters. While high-frequency plankton time series have provided unprecedented fundamental information about physical and biological processes, understanding and identifying the underlying mechanisms that influence plankton dynamic remains a major challenge. We use high-frequency plankton data from PlanktonScope as an example to examine the impacts of physical and biological processes on plankton dynamics at different temporal scales. Frequency patterns were identified for both environmental factors and different plankton groups that matched in time. Using logistic regression models on the selected daily peaks for different plankton groups, we found that diurnal cycle,\ monsoon\ season, and major\ episodic events, such as\ typhoons, had major impacts on the dynamics of plankton, as proxied by our indicators. We further synthesized, across multiple spatiotemporal scales in the study area, the impacts of various processes on plankton with different mobility. Our study demonstrates that the suite of plankton indicators simultaneously generated from PlanktonScope provides a robust holistic view of\ pelagic ecosystem\ status over a broad range of spatiotemporal scales. In situ imaging systems like PlanktonScope are promising tools for near real-time plankton monitoring and a deep understanding of plankton dynamics.}, issn = {13851101}, doi = {10.1016/j.seares.2022.102283}, url = {https://linkinghub.elsevier.com/retrieve/pii/S1385110122001216}, author = {Bi, Hongsheng and Song, Junting and Zhao, Jian and Liu, Hui and Cheng, Xuemin and Wang, Linlin and Cai, Zhonghua and Benfield, Mark C. and Otto, Saskia and Goberville, Eric and Keister, Julie and Yang, Yong and Yu, Xinglong and Cai, Jun and Ying, Kezhen and Alessandra Conversi} } @article {8707, title = {Are we ready to track climate-driven shifts in marine species across international boundaries? - A global survey of scientific bottom trawl data}, journal = {Global Change Biology}, volume = {27}, year = {2021}, month = {Jan-01-2021}, pages = {220 - 236}, issn = {1354-1013}, doi = {10.1111/gcb.v27.210.1111/gcb.15404}, url = {https://onlinelibrary.wiley.com/toc/13652486/27/2}, author = {Maureaud, Aurore and Frelat, Romain and P{\'e}cuchet, Laur{\`e}ne and Shackell, Nancy and M{\'e}rigot, Bastien and Pinsky, Malin L. and Amador, Kofi and Anderson, Sean C. and Arkhipkin, Alexander and Auber, Arnaud and Barri, I{\c c}a and Bell, Richard J. and Belmaker, Jonathan and Beukhof, Esther and Camara, Mohamed L. and Guevara-Carrasco, Renato and Choi, Junghwa and Christensen, Helle T. and Conner, Jason and Cubillos, Luis A. and Diadhiou, Hamet D. and Edelist, Dori and Emblemsv{\r a}g, Margrete and Ernst, Billy and Fairweather, Tracey P. and Fock, Heino O. and Friedland, Kevin D. and Garcia, Camilo B. and Gascuel, Didier and Gislason, Henrik and Goren, Menachem and Guitton, J{\'e}r{\^o}me and Jouffre, Didier and Hattab, Tarek and Hidalgo, Manuel and Kathena, Johannes N. and Knuckey, Ian and Kid{\'e}, Sa{\"\i}kou O. and Koen-Alonso, Mariano and Koopman, Matt and Kulik, Vladimir and Le{\'o}n, Jacqueline Palacios and Levitt-Barmats, Ya{\textquoteright}arit and Lindegren, Martin and Llope, Marcos and Massiot-Granier, F{\'e}lix and Masski, Hicham and McLean, Matthew and Meissa, Beyah and M{\'e}rillet, Laur{\`e}ne and Mihneva, Vesselina and Nunoo, Francis K. E. and O{\textquoteright}Driscoll, Richard and O{\textquoteright}Leary, Cecilia A. and Petrova, Elitsa and Ramos, Jorge E. and Refes, Wahid and Rom{\'a}n-Marcote, Esther and Siegstad, Helle and Sobrino, Ignacio and S{\'o}lmundsson, J{\'o}n and Sonin, Oren and Spies, Ingrid and Steingrund, Petur and Stephenson, Fabrice and Stern, Nir and Tserkova, Feriha and Tserpes, Georges and Tzanatos, Evangelos and Rijn, Itai and Zwieten, Paul A. M. and Vasilakopoulos, Paraskevas and Yepsen, Daniela V. and Ziegler, Philippe and Thorson, James} } @article {8357, title = {Development of robust assessment methods and harvest strategies for spatially complex, multi-jurisdictional toothfish fisheries in the Southern Ocean}, year = {2021}, month = {2021}, pages = {266 pp}, institution = {Fisheries Research and Development Corporation Project n{\textdegree}2013/013}, type = {Final report}, url = {http://ecite.utas.edu.au/143108}, author = {Philippe Ziegler and Burch, Paul and Clara P{\'e}ron and Welsford, Dirk and Bryn, Farmer and Yates, Peter and Potts, J. and Woodcock, Emma and Barnes, T. and Guy Duhamel and Gardner, C.} } @article {8452, title = {Influence des perturbations anthropiques sur les communaut{\'e}s de petits mammif{\`e}res des savanes gabonaises}, journal = {International Journal of Biological and Chemical Sciences}, volume = {15}, year = {2021}, month = {Jul-11-2022}, pages = {1355 - 1368}, issn = {1991-8631}, doi = {10.4314/ijbcs.v15i4.5}, url = {https://www.ajol.info/index.php/ijbcs/article/view/217478}, author = {Mboumba, Jean-Fran{\c c}ois and Momboua, Brice Roxan and Perin, Eline and Fr{\'e}d{\'e}ric Ysnel} } @article {8446, title = {Involvement of RFamide neuropeptides in polyp contraction of the adult scleractinian corals Euphyllia ancora and Stylophora pistillata}, journal = {General and Comparative Endocrinology}, volume = {314}, year = {2021}, month = {Jan-12-2021}, pages = {113905}, issn = {00166480}, doi = {10.1016/j.ygcen.2021.113905}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0016648021001982}, author = {Zhang, Yan and Shikina, Shinya and Ho, Yu-Ying and Chiu, Yi-Ling and I-Chen Yao, Jack and C{\'e}line Zatylny-Gaudin and Sylvie Dufour and Chang, Ching-Fong} } @article {8794, title = {Involvement of Transforming Growth Factor Beta family genes in gonadal differentiation in Japanese eel, Anguilla japonica, according to sex-related gene expressions}, journal = {Cells}, volume = {10}, year = {2021}, pages = {3007}, url = {https://doi.org/10.3390/cells10113007}, author = {Lin, Chien-Ju and Jeng, Shan-Ru and Lei, Zhen-Yuan and Yueh, When-Shiun and Sylvie Dufour and Wu, Guan-Chung and Chang, Ching-Fong} } @article {8454, title = {Isolation-by-distance and male-biased dispersal at a fine spatial scale: a study of the common European adder (Vipera berus) in a rural landscape}, journal = {Conservation Genetics}, volume = {22}, year = {2021}, month = {Jan-10-2021}, pages = {823 - 837}, issn = {1566-0621}, doi = {10.1007/s10592-021-01365-y}, url = {https://link.springer.com/10.1007/s10592-021-01365-y}, author = {Fran{\c c}ois, Donatien and Ursenbacher, Sylvain and Boissinot, Alexandre and Fr{\'e}d{\'e}ric Ysnel and Lourdais, Olivier} } @article {8459, title = {Small- and large-scale processes including anthropogenic pressures as drivers of gastropod communities in the NE Atlantic coast: A citizen science based approach}, journal = {Science of The Total Environment}, year = {2021}, month = {Jan-11-2021}, pages = {151600}, issn = {00489697}, doi = {10.1016/j.scitotenv.2021.151600}, url = {https://linkinghub.elsevier.com/retrieve/pii/S004896972106678X}, author = {Serranito, Bruno and Dim{\'e}glio, Tristan and Fr{\'e}d{\'e}ric Ysnel and Liz{\'e}, Anne and Eric Feunteun} } @article {8453, title = {Small rodent communities (Muridae) in Gabonese savannas: species diversity and biogeographical affinitiesAbstract}, journal = {Mammalia}, volume = {85}, year = {2021}, month = {Jan-05-2021}, pages = {256 - 268}, issn = {0025-1461}, doi = {10.1515/mammalia-2020-0079}, url = {https://www.degruyter.com/document/doi/10.1515/mammalia-2020-0079/html}, author = {Mboumba, Jean-Fran{\c c}ois and Herv{\'e}, Maxime R. and Guyot, V{\'e}ronique and Fr{\'e}d{\'e}ric Ysnel} } @article {7164, title = {Deciphering mollusc shell production: the roles of genetic mechanisms through to ecology, aquaculture and biomimetics.}, journal = {Biol Rev Camb Philos Soc}, year = {2020}, month = {2020 Jul 31}, abstract = {

Most molluscs possess shells, constructed from a vast array of microstructures and architectures. The fully formed shell is composed of calcite or aragonite. These CaCO crystals form complex biocomposites with proteins, which although typically less than 5\% of total shell mass, play significant roles in determining shell microstructure. Despite much research effort, large knowledge gaps remain in how molluscs construct and maintain their shells, and how they produce such a great diversity of forms. Here we synthesize results on how shell shape, microstructure, composition and organic content vary among, and within, species in response to numerous biotic and abiotic factors. At the local level, temperature, food supply and predation cues significantly affect shell morphology, whilst salinity has a much stronger influence across latitudes. Moreover, we emphasize how advances in genomic technologies [e.g. restriction site-associated DNA sequencing (RAD-Seq) and epigenetics] allow detailed examinations of whether morphological changes result from phenotypic plasticity or genetic adaptation, or a combination of these. RAD-Seq has already identified single nucleotide polymorphisms associated with temperature and aquaculture practices, whilst epigenetic processes have been shown significantly to modify shell construction to local conditions in, for example, Antarctica and New Zealand. We also synthesize results on the costs of shell construction and explore how these affect energetic trade-offs in animal metabolism. The cellular costs are still debated, with CaCO precipitation estimates ranging from 1-2 J/mg to 17-55 J/mg depending on experimental and environmental conditions. However, organic components are more expensive (~29 J/mg) and recent data indicate transmembrane calcium ion transporters can involve considerable costs. This review emphasizes the role that molecular analyses have played in demonstrating multiple evolutionary origins of biomineralization genes. Although these are characterized by lineage-specific proteins and unique combinations of co-opted genes, a small set of protein domains have been identified as a conserved biomineralization tool box. We further highlight the use of sequence data sets in providing candidate genes for in situ localization and protein function studies. The former has elucidated gene expression modularity in mantle tissue, improving understanding of the diversity of shell morphology synthesis. RNA interference (RNAi) and clustered regularly interspersed short palindromic repeats - CRISPR-associated protein 9 (CRISPR-Cas9) experiments have provided proof of concept for use in the functional investigation of mollusc gene sequences, showing for example that Pif (aragonite-binding) protein plays a significant role in structured nacre crystal growth and that the Lsdia1 gene sets shell chirality in Lymnaea stagnalis. Much research has focused on the impacts of ocean acidification on molluscs. Initial studies were predominantly pessimistic for future molluscan biodiversity. However, more sophisticated experiments incorporating selective breeding and multiple generations are identifying subtle effects and that variability within mollusc genomes has potential for adaption to future conditions. Furthermore, we highlight recent historical studies based on museum collections that demonstrate a greater resilience of molluscs to climate change compared with experimental data. The future of mollusc research lies not solely with ecological investigations into biodiversity, and this review synthesizes knowledge across disciplines to understand biomineralization. It spans research ranging from evolution and development, through predictions of biodiversity prospects and future-proofing of aquaculture to identifying new biomimetic opportunities and societal benefits from recycling shell products.

}, issn = {1469-185X}, doi = {10.1111/brv.12640}, author = {Clark, Melody S and Peck, Lloyd S and Arivalagan, Jaison and Backeljau, Thierry and Berland, Sophie and Cardoso, Joao C R and Caurcel, Carlos and Chapelle, Gauthier and De Noia, Michele and Dupont, Sam and Gharbi, Karim and Hoffman, Joseph I and Last, Kim S and Marie, Arul and Melzner, Frank and Michalek, Kati and Morris, James and Power, Deborah M and Ramesh, Kirti and Sanders, Trystan and Sillanp{\"a}{\"a}, Kirsikka and Sleight, Victoria A and Stewart-Sinclair, Phoebe J and Sundell, Kristina and Telesca, Luca and Vendrami, David L J and Ventura, Alexander and Wilding, Thomas A and Yarra, Tejaswi and Harper, Elizabeth M} } @article {8460, title = {Diversit{\'e} des assemblages d{\textquoteright}araign{\'e}es dans les {\'e}cosyst{\`e}mes savanicoles des Plateaux Bat{\'e}k{\'e}, Haut-Ogoou{\'e}, Gabon}, journal = {Afrique Science}, volume = {16}, year = {2020}, pages = {106-117}, author = {Alban-Michel NGU{\'E}MA NGU{\'E}MA and Assane NDIAYE and Lynda Chancelia NKOGHE NKOGHE and Jacques Fran{\c c}ois MAVOUNGOU1 and Fr{\'e}d{\'e}ric Ysnel} } @article {8081, title = {Elevated estradiol-17β levels inhibit final oocyte maturation via G protein-coupled estrogen receptor (Gper) in yellowfin porgy, Acanthopagrus latus}, journal = {General and Comparative Endocrinology}, volume = {299}, year = {2020}, month = {Jan-12-2020}, pages = {113587}, issn = {00166480}, doi = {10.1016/j.ygcen.2020.113587}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0016648020303403}, author = {Jeng, Shan-Ru and Thomas, Peter and Pang, Yefei and Sylvie Dufour and Lin, Chien-Ju and Yueh, Wen-Shiun and Chang, Ching-Fong} } @article {7385, title = {Functional diversity of microboring Ostreobium algae isolated from corals}, journal = {Environmental Microbiology}, year = {2020}, month = {Dec-10-2020}, abstract = {The filamentous chlorophyte\ Ostreobium\ sp. dominates shallow marine carbonate microboring communities, and is one of the major agents of reef bioerosion. While its large genetic diversity has emerged, its physiology remains little known, with unexplored relationship between genotypes and phenotypes (endolithic\ versus\ free-living growth forms). Here, we isolated nine strains affiliated to two lineages of\ Ostreobium\ (\>8\% sequence divergence of the plastid gene\ rbcL), one of which was assigned to the family Odoaceae, from the fast-growing coral host\ Pocillopora acuta\ Lamarck 1816. Free-living isolates maintained their bioerosive potential, colonizing pre-bleached coral carbonate skeletons. We compared phenotypes, highlighting shifts in pigment and fatty acid compositions, carbon to nitrogen ratios and stable isotope compositions (δ13C and δ15N). Our data show a pattern of higher chlorophyll\ b\ and lower arachidonic acid (20:4ω6) content in endolithic\ versus\ free-living\ Ostreobium. Photosynthetic carbon fixation and nitrate uptake, quantified via 8 h pulse-labeling with\ 13C-bicarbonate and\ 15N-nitrate, showed lower isotopic enrichment in endolithic compared to free-living filaments. Our results highlight the functional plasticity of\ Ostreobium\ phenotypes. The isotope tracer approach opens the way to further study the biogeochemical cycling and trophic ecology of these cryptic algae at coral holobiont and reef scales.}, issn = {1462-2912}, doi = {10.1111/1462-2920.15256}, url = {https://onlinelibrary.wiley.com/doi/10.1111/1462-2920.15256}, author = {Mass{\'e}, Ana{\"\i}s and Tribollet, Aline and Tarik Meziane and Bourguet-Kondracki, Marie-Lise and Y{\'e}pr{\'e}mian, Claude and S{\`e}ve, Charlotte and Thiney, Najet and Longeon, Arlette and Cout{\'e}, Alain and Domart-Coulon, Isabelle} } @article {7886, title = {Hi{\'e}rarchisation de la valeur de pr{\'e}servation des oiseaux nicheurs {\`a} enjeux : application d{\textquoteright}un indice int{\'e}grateur pour le d{\'e}partement d{\textquoteright}Ille-et-Vilaine}, journal = {Naturae}, year = {2020}, month = {Jun-11-2021}, doi = {10.5852/naturae2020a13}, url = {http://sciencepress.mnhn.fr/fr/periodiques/naturae/2020/13}, author = {Fr{\'e}d{\'e}ric Ysnel and Morel, Lo{\"\i}s and DEVOGEL, Pierre and ALTHERR, Thomas and Dugravot, S{\'e}bastien and MOREL, R{\'e}gis and LEBAS, Jean-Fran{\c c}ois} } @article {8449, title = {Passive rewilding may (also) restore phylogenetically rich and functionally resilient forest plant communities.}, journal = {Ecol Appl}, volume = {30}, year = {2020}, month = {2020 01}, pages = {e02007}, abstract = {

Passive rewilding is increasingly seen as a promising tool to counterbalance biodiversity losses and recover native forest ecosystems. One key question, crucial to understanding assembly processes and conservation issues underlying land-use change, is the extent to which functional and phylogenetic diversity may recover in spontaneous recent woodlands. Here, we compared understorey plant communities of recent woodlands (which result from afforestation on agricultural lands during the 20th century) with those of ancient forests (uninterrupted for several centuries) in a hotspot of farmland abandonment in western Europe. We combined taxonomic, functional, and phylogenetic diversity metrics to detect potential differences in community composition, structure (richness, divergence), conservation importance (functional originality and specialization, evolutionary distinctiveness) and resilience (functional redundancy, response diversity). The recent and ancient forests harbored clearly distinct compositions, especially regarding the taxonomic and phylogenetic facets. Recent woodlands had higher taxonomic, functional and phylogenetic richness and a higher evolutionary distinctiveness, whereas functional divergence and phylogenetic divergence were higher in ancient forests. On another hand, we did not find any significant differences in functional specialization, originality, redundancy, or response diversity between recent and ancient forests. Our study constitutes one of the first empirical pieces of evidence that recent woodlands may spontaneously regain plant communities phylogenetically rich and functionally resilient, at least as much as those of ancient relict forests. As passive rewilding is the cheapest restoration method, we suggest that it should be a very useful tool to restore and conserve native forest biodiversity and functions, especially when forest areas are restricted and fragmented.

}, keywords = {Biodiversity, Ecosystem, Europe, Forests, Phylogeny}, issn = {1051-0761}, doi = {10.1002/eap.2007}, author = {Morel, Lo{\"\i}s and Barbe, Lou and Jung, Vincent and Cl{\'e}ment, Bernard and Schnitzler, Annik and Fr{\'e}d{\'e}ric Ysnel} } @article {7545, title = {Public Perceptions of Mangrove Forests Matter for Their Conservation}, journal = {Frontiers in Marine Science}, volume = {7}, year = {2020}, month = {Jul-11-2021}, abstract = {Iconic species and landscapes attract public attention to help reverse the degradation of ecosystems and their biodiversity (Thompson and Rog, 2019); sharing their images on social media can act as a powerful way to influence perceptions and drive positive actions by the public (Wu et al., 2018). Social media platforms such as Twitter, Facebook and Instagram have been used to great effect to communicate the urgency required to halt and reverse tropical forest loss (Lamb et al., 2005) and the plight of coral reefs (Curnock et al., 2019). Ecosystems such as seagrass meadows, mudflats, and mangrove forests receive substantially less media exposure (Duarte et al., 2008). Yet these under-recognized ecosystems are hugely important for local and global societies, providing benefits such as shoreline protection (Barbier, 2016), fisheries (Carrasquilla-Henao and Juanes, 2017), carbon capture and storage (Duarte et al., 2013), alongside supporting rich marine and terrestrial biodiversity (Sievers et al., 2019;\ Thompson and Rog, 2019) (Figure 1). Apart from these important ecosystem functions, goods and services, mangrove forests are home to a huge diversity of organisms with ecologically and evolutionarily unique adaptations to life in the intertidal zone, including vivipary and salt tolerance in trees, air-breathing in crabs and amphibious behavior in fish (mudskippers); this makes mangrove forests a dynamic and fascinating evolutionary laboratory.}, doi = {10.3389/fmars.2020.60365110.3389/fmars.2020.603651.s001}, url = {https://www.frontiersin.org/articles/10.3389/fmars.2020.603651/full}, author = {Dahdouh-Guebas, Farid and Ajonina, Gordon N. and Amir, A. Aldrie and Andradi-Brown, Dominic A. and Aziz, Irfan and Balke, Thorsten and Barbier, Edward B. and Cannicci, Stefano and Cragg, Simon M. and Cunha-Lignon, Mar{\'\i}lia and Curnick, David J. and Duarte, Carlos M. and Duke, Norman C. and Endsor, Charlie and Fratini, Sara and Feller, Ilka C. and Fromard, Fran{\c c}ois and Hug{\'e}, Jean and Huxham, Mark and Kairo, James G. and Kajita, Tadashi and Kathiresan, Kandasamy and Koedam, Nico and Lee, Shing Yip and Lin, Hsing-Juh and Mackenzie, Jock R. and Mangora, Mwita M. and Marchand, Cyril and Tarik Meziane and Minchinton, Todd E. and Pettorelli, Nathalie and Polan{\'\i}a, Jaime and Polgar, Gianluca and Poti, Meenakshi and Primavera, Jurgenne and Quarto, Alfredo and Rog, Stefanie M. and Satyanarayana, Behara and Schaeffer-Novelli, Yara and Spalding, Mark and Van der Stocken, Tom and Wodehouse, Dominic and Yong, Jean W. H. and Zimmer, Martin and Friess, Daniel A.} } @article {6732, title = {Swinging boat moorings: Spatial heterogeneous damage to eelgrass beds in a tidal ecosystem}, journal = {Estuarine, Coastal and Shelf Science}, volume = {235}, year = {2020}, pages = {106581}, abstract = {Seagrass meadows are currently known to be subjected to huge physical disturbances including boat moorings in shallow bays. We aimed to identify the impact of permanent swing mooring on the fast-growing seagrass Zostera marina in a mega-tidal area. Coupling the hydrodynamic MARS3D model to simulate mooring chain movements and in situ measurements of plant traits, we analyzed the structural responses of the eelgrass bed to scraping disturbance in the western English Channel (France). A comparison of the results with a reference site without any permanent swing boat mooring showed a significant impact on eelgrass structure (shoot density, leaf size, leaf dry weight), depending on the direction and distance from the mooring. Zostera marina was absent close to the mooring fixation point in three out of the four directions we evaluated. Beyond 5\ m, the canopy height remained lower than in the reference site, most likely due to regular disturbances by mooring chains. Conversely, shoot density beyond 5\ m was higher than in the reference site. This adaptive response counter-balanced the decrease in canopy height at these distances. The fluctuations of the structure of the eelgrass cover (number of shoots, leaf length) at a small spatial scale was clearly in accordance with the scraping intensity simulated by the MARS3D model. The tidal currents coupled to tidal amplitude variability imply a small-scale heterogeneous effect of permanent mooring on the benthic compartment, previously undetected by an aerial survey. The present results highlight the interest of coupling approaches so as to understand how physical pressure influences fast-growing species traits. The resulting important modifications could imply a more functional impact such as biodiversity loss and carbon sequestration, which is beyond the scope of the present paper.}, keywords = {Anthropogenic disturbances, Boat mooring, Modeling approach, SCUBA-Diving, Seagrass ecology}, issn = {0272-7714}, doi = {https://doi.org/10.1016/j.ecss.2020.106581}, url = {http://www.sciencedirect.com/science/article/pii/S027277141930068X}, author = {Vincent Ouisse and Irina Marchand-Jouravleff and Annie Fiandrino and Eric Feunteun and Fr{\'e}d{\'e}ric Ysnel} } @article {7163, title = {Using Modern Conservation Tools for Innovative Management of Coral Reefs: The MANACO ConsortiumVideo_1.MP4}, journal = {Frontiers in Marine Science}, volume = {7}, year = {2020}, month = {Sep-07-2021}, doi = {10.3389/fmars.2020.0060910.3389/fmars.2020.00609.s001}, url = {https://www.frontiersin.org/article/10.3389/fmars.2020.00609/full}, author = {Selmoni, Oliver and Lecellier, Ga{\"e}l and Ainley, Lara and Collin, Antoine and Doucet, Raimana and Dubousquet, Vaimiti and Feremaito, Hudson and Ito Waia, Edouard and Kininmonth, Stuart and Magalon, H{\'e}l{\`e}ne and Malimali, Siola{\textquoteright}a and Maugateau, Ateliana and Meibom, Anders and Mosese, Stephen and Ren{\'e}-Trouillefou, Malika and Satoh, Noriyuki and van Oppen, Madeleine J. H. and Xozam{\'e}, Andr{\'e} and Y{\'e}kawene, Maxime and Joost, St{\'e}phane and Berteaux-Lecellier, V{\'e}ronique} } @article {6016, title = {Dmrt1 (doublesex and mab-3-related transcription factor 1) expression during gonadal development and spermatogenesis in the Japanese eel.}, journal = {General and Comparative Endocrinology}, volume = {279}, year = {2019}, pages = {154-163}, author = {Jeng, Shan-Ru and Wu, Guan-Chung and Wen-Shiun Yueh and Kuo, S-F and Sylvie Dufour and Chang, Ching-Fong} } @article {8451, title = {Examples of Understory Plant Communities Observed in Post-Agricultural Recent Woodlands and Uninterrupted Ancient Forests}, journal = {Bulletin of the Ecological Society of America}, volume = {101}, year = {2019}, month = {01/2020}, pages = {e01634}, author = {Morel, Lo{\"\i}s and Barbe, Lou and Jung, Vincent and Cl{\'e}ment, Bernard and Schnitzler, Annik and Fr{\'e}d{\'e}ric Ysnel} } @article {7837, title = {The first winter influences lifetime wintering decisions in a partially migrant bird}, journal = {Animal Behaviour}, volume = {149}, year = {2019}, month = {Jan-03-2019}, pages = {23 - 32}, issn = {00033472}, doi = {10.1016/j.anbehav.2018.12.018}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0003347219300016}, author = {Chambon, R{\'e}mi and G{\'e}linaud, Guillaume and Paillisson, Jean-Marc and Lemesle, Jean-Christophe and Fr{\'e}d{\'e}ric Ysnel and Dugravot, S{\'e}bastien} } @article {6018, title = {Functional divergence of thyrotropin beta-subunit paralogs gives new insights into salmon smoltification metamorphosis}, journal = {Scientific Reports}, volume = {9}, year = {2019}, pages = {4561}, author = {Fleming, Mitchell S and Maugars, Gersende and Lafont, Anne-Gaelle and Rancon, Jocelyn and Fontaine, Romain and Nourizadeh-Lillabadi, Rasoul and Weltzien, Finn-Arne and Santidrian Yebra-Pimentel, Elena and Dirks, Ron and McCormick, Stephen D and Rousseau, Karine and Martin, Patrick and Sylvie Dufour} } @article {7890, title = {Islet Creation Increases Nesting Opportunities of the Pied Avocet (Recurvirostra avosetta) in a Managed Salt Pan Area}, journal = {Waterbirds}, volume = {42}, year = {2019}, month = {Jan-03-2019}, pages = {22}, doi = {10.1675/063.042.0103}, url = {https://bioone.org/journals/waterbirds/volume-42/issue-1/063.042.0103/Islet-Creation-Increases-Nesting-Opportunities-of-the-Pied-Avocet-Recurvirostra/10.1675/063.042.0103.full}, author = {Chambon, R{\'e}mi and Dugravot, S{\'e}bastien and Fr{\'e}d{\'e}ric Ysnel and G{\'e}linaud, Guillaume} } @article {5971, title = {The long time adaptation of coelacanths to moderate deep water: reviewing the evidences}, journal = {Bulletin of Kitakyushu Museum of Natural History and Human History. Series A: Natural History}, volume = {17}, year = {2019}, pages = {29-35}, author = {Cupello, C and Cl{\'e}ment, Ga{\"e}l and Fran{\c c}ois J Meunier and Herbin, Marc and Yoshikata Yabumoto and Brito, Paulo M.} } @article {6687, title = {Spontaneous recovery of functional diversity and rarity of ground-living spiders shed light on the conservation importance of recent woodlands}, journal = {Biodiversity and Conservation}, volume = {28}, year = {2019}, month = {Jan-03-2019}, pages = {687 - 709}, issn = {0960-3115}, doi = {10.1007/s10531-018-01687-3}, url = {http://link.springer.com/10.1007/s10531-018-01687-3}, author = {Morel, Lo{\"\i}s and Dujol, Beno{\^\i}t and Courtial, Cyril and Vasseur, Manon and Leroy, Boris and Fr{\'e}d{\'e}ric Ysnel} } @article {5961, title = {The diet of the Early Cretaceous coelacanth {\textdagger}Axelrodichthys araripensis Maisey, 1986 (Actinistia: Mawsoniidae)}, journal = {Cybium}, volume = {42}, year = {2018}, pages = {105-111}, doi = {10.26028/cybium/2018-421-011}, url = {http://sfi-cybium.fr/fr/diet-early-cretaceous-coelacanth-{\textdagger}axelrodichthys-araripensis-maisey-1986-actinistia-mawsoniidae}, author = {Meunier, Francois J. and Cupello, Camila and Yoshikata Yabumoto and Brito, Paulo M.} } @article {7852, title = {Partial migration in inexperienced pied avocets Recurvirostra avosetta : distribution pattern and correlates}, journal = {Journal of Avian Biology}, volume = {49}, year = {2018}, month = {Jan-06-2018}, doi = {10.1111/jav.01549}, url = {http://doi.wiley.com/10.1111/jav.01549}, author = {Chambon, R{\'e}mi and Dugravot, S{\'e}bastien and Paillisson, Jean-Marc and Lemesle, Jean-Christophe and Fr{\'e}d{\'e}ric Ysnel and G{\'e}linaud, Guillaume} } @article {7891, title = {Spider assemblage structure in a neotropical rainforest-inselberg complex: ecological and methodological insights from a small-scale intensive survey}, journal = {Journal of Tropical Ecology}, volume = {59}, year = {2018}, pages = {21-34}, keywords = {Araneae, composition, day-time, French Guiana, non-parametric estimators, richness, sampling method}, url = {https://hal.inrae.fr/hal-02629375}, author = {Privet, Ka{\"\i}na and Courtial, Cyril and Decaens, Thibaud and Djoudi, El Aziz and VEDEL, Vincent and Fr{\'e}d{\'e}ric Ysnel and P{\'e}tillon, Julien} } @article {4751, title = {{Cross-taxon congruence in the rarity of subtidal rocky marine assemblages : No taxonomic shortcut for conservation monitoring}}, journal = {Ecological Indicators}, volume = {77}, year = {2017}, pages = {239{\textendash}249}, abstract = {The implementation of protection strategies such as the European Marine Strategy Framework Directive (2008/56/EC) is impeded for subtidal rock bottom habitats because of high sampling costs due to a very wide taxonomic diversity, and a lack of suitable evaluation tools to estimate their conservation importance. In this study, we seek to provide an evaluation procedure by (1) investigating the distribution of rarity among subtidal rock bottom phyla; (2) searching for potential surrogate phyla with a cross-taxon congruence approach based on their rarity; (3) proposing an appropriate multi-phyla indicator to evaluate the importance of subtidal rocky habitats for conservation. We analysed the distribution of 548 species belonging to 8 phyla sampled in 137 assemblages in subtidal rocky areas located around Brittany, Western France. We applied the Index of Relative Rarity, a flexible method which fits rarity weights to species depending on their respective phyla. We found only weak congruence in rarity patterns among phyla, which prevented any attempt to identify surrogate phyla. This finding has important implications for the conservation of subtidal rocky habitats as it means that there is no shortcut to monitor their rarity: working on a subset of phyla would imply a biased evaluation of biodiversity. Consequently, we propose a multi-phyla Index of Relative Rarity combining all phyla which allowed us to successfully describe rarity patterns across all sampled sites.}, keywords = {occurrence-based rarity, subtidal conservation}, issn = {1470-160X}, doi = {10.1016/j.ecolind.2017.02.012}, url = {http://dx.doi.org/10.1016/j.ecolind.2017.02.012}, author = {Leroy, Boris and R{\'e}gis Gallon and Eric Feunteun and Robuchon, Marine and Fr{\'e}d{\'e}ric Ysnel} } @proceedings {7892, title = {Le Mont-Saint-Michel et sa baie peuvent-ils se r{\'e}concilier ?}, volume = {12, s{\'e}rie 3}, year = {2017}, month = {2019}, pages = {103-112}, edition = {Documents Phytosociologiques}, author = {Canard, Alain and Prigent, Lionel and Fr{\'e}d{\'e}ric Ysnel and Robin, Thierry and Alexandre Carpentier and Lefeuvre, Jean-Claude and Bioret, Fr{\'e}d{\'e}ric} } @article {3773, title = {The Dopaminergic Neurons Controlling Anterior Pituitary Functions: Anatomy and Ontogenesis in Zebrafish.}, journal = {Endocrinology}, year = {2015}, month = {2015 May 12}, pages = {en20151091}, abstract = {

Dopaminergic (DA) neurons located in the preoptico-hypothalamic region of the brain exert a major neuroendocrine control on reproduction, growth and homeostasis by regulating the secretion of anterior pituitary (or adenohypophysis) hormones. Here, using a retrograde tract tracing experiment, we identified the neurons playing this role in the zebrafish. The DA cells projecting directly to the anterior pituitary are localized in the most anteroventral part of the preoptic area, and we named them preoptico-hypophyseal DA (POHDA) neurons. During development, these neurons do not appear before 72 hours post fertilization (hpf) and are the last dopaminergic cell group to differentiate. We found that the number of neurons in this cell population continues to increase life-long, proportionally to the growth of the fish. BrdU incorporation analysis suggested that this increase is due to continuous neurogenesis and not due to a phenotypic change in already existing neurons. Finally, expression profiles of several genes (foxg1a, dlx2a and nr4a2a/b) were different in the POHDA compared to the adjacent suprachiasmatic DA neurons, suggesting that POHDA neurons develop as a distinct DA cell population in the preoptic area. This study offers some insights into the regional identity of the preoptic area and provides the first bases for future functional genetic studies on the development of DA neurons controlling anterior pituitary functions.

}, issn = {1945-7170}, doi = {10.1210/en.2015-1091}, author = {Fontaine, Romain and Affaticati, Pierre and Bureau, Charlotte and Colin, Ingrid and Demarque, Micha{\"e}l and Sylvie Dufour and Vernier, Philippe and Yamamoto, Kei and Pasqualini, Catherine} } @article {3414, title = {Effects of CO2, nutrients and light on coastal plankton: II. Metabolic rates. Aquatic Biology}, journal = {Aquatic Biology}, volume = {22}, year = {2014}, month = {11/20/14}, pages = {43-57}, abstract = {We conducted a microcosm experiment aimed at studying the interactive effects of high CO2, nutrient loading and irradiance on the metabolism of a planktonic community sampled in the Western Mediterranean near the coast of M{\'a}laga. Changes in the metabolism of phytoplankton and bacterioplankton were observed for 7 d under 8 treatment conditions, representing the full factorial combinations of 2 levels each of CO2, nutrient concentration and solar radiation exposure. The initial plankton sample was collected at the surface from a stratified water column, indicating that phytoplankton were naturally acclimated to high irradiance and low nutrient concentrations. Nutrient addition combined with high irradiance resulted in a significant increase in primary production. Nitrate uptake by phytoplankton was also stimulated under high nutrient conditions. High nutrients, high irradiance and the combination of low CO2 and high irradiance positively affected bacterial production. Light was the main factor affecting the respiration rates of the community, which were higher at the high light level. After 7 d of incubation, nutrient loading was the only factor that significantly affected the amount of particulate organic carbon (POC) accumulated in the microcosms. Therefore, the changes in metabolic rates produced at high CO2 had no effect on net production of particulate organic matter. If these results are extrapolated to the natural environment, it could be hypothesized that high levels of CO2 will have a limited impact on biological pump activity in the northern Alboran Sea since it is assumed that POC export towards deeper layers determines the potential for carbon sequestration.}, author = {Mercado, J. M. and Sobrino, C and Neale, P.J. and Segovia, M. and Reul, A. and Amorim, A.L. and Carrillo, P and Pascal Claquin and Cabrerizo, M.J and Le{\'o}n, P. and Lorenzo, M.R and Medina, J. M. and Montecino, V. and Napol{\'e}on, C and Prasil, 0. and Putzeys, S and Salles, S and Yebra, L} } @article {3290, title = {Fish-AMAZBOL: a database on freshwater fishes of the Bolivian Amazon}, journal = {Hyrobiologia}, volume = {732}, year = {2014}, month = {07/2014}, pages = {pp. 19-27}, abstract = {The Bolivian part of the Amazon Basin contains a mega diverse and well-preserved fish fauna. Since the last decade, this fish fauna has received an increasing attention from scientists and the national authorities as fishes represent one of the most important sources of proteins for local human communities. However, this fish fauna still remains poorly documented. Here, we present a database for fishes from the Bolivian Amazon. To build the database, we conducted an extensive literature survey of native and non-native (exotic) fishes inhabiting all major sub-drainages of the Bolivian Amazon. The database, named Fish-AMAZBOL, contains species lists for 13 Amazonian hydrological units, covering 100\% of the Bolivian Amazon and approximately 65\% (722,137 km2) of the all territory. Fish-AMAZBOL includes 802 valid species, 12 of them being non-native, that have been checked for systematic reliability and consistency. To put this number in perspective, this represents around 14\% of the all Neotropical ichthyofauna and around 6\% of all strictly freshwater fishes inhabiting the planet. This database is currently the most comprehensive database of native and non-native fish species richness available so far for the Bolivian Amazon.}, keywords = {Amazon River basin, Bolivia, Checklist, Freshwater fishes, Madera River, South America}, doi = {10.1007/s10750-014-1841-5}, url = {http://link.springer.com/article/10.1007/s10750-014-1841-5}, author = {Carvajal-Vallejos, F M and R{\'e}my Bigorne and Zeballos Fernandez, Am{\'e}rica J. and Sarmiento, Jaime and Barrera Soraya and Yunoki, T and Marc Pouilly and Zubieta Jos{\'e} and De La Barra, Evans and Michel J{\'e}gu and Maldonado, Mabel and Van Damme, Paul and C{\'e}spedes, Ricardo and Thierry Oberdorff} } @article {3244, title = {Forecasted climate and land use changes, and protected areas: the contrasting case of spiders}, journal = {Diversity and Distributions}, volume = {20}, year = {2014}, pages = {686-697}, keywords = {Arthropods, ensemble forecast, global changes, species distribution models, threatened species, uncertainty}, doi = {10.1111/ddi.12191}, author = {Leroy, Boris and Bellard, C{\'e}line and Dubos, Nicolas and Colliot, Arthur and Vasseur, Manon and Courtial, Cyril and Bakkenes, Michel and Canard, A and Fr{\'e}d{\'e}ric Ysnel} } @article {3639, title = {Neuroendocrine gene expression reveals a decrease in dopamine D2B receptor with no changes in GnRH system during prepubertal metamorphosis of silvering in wild Japanese eel.}, journal = {Gen Comp Endocrinol}, volume = {206}, year = {2014}, month = {2014 Sep 15}, pages = {8-15}, abstract = {

Silvering is a prepubertal metamorphosis preparing the eel to the oceanic reproductive migration. A moderate gonad development occurs during this metamorphosis from the sedentary yellow stage to the migratory silver stage. The aim of this study was to elucidate the molecular aspects of various endocrine parameters of BPG axis at different ovarian developmental stages in wild yellow and silver female Japanese eels. The GSI of the sampled female eels ranged between 0.18 and 2.3\%, corresponding to yellow, pre-silver and silver stages. Gonad histology showed changes from previtellogenic oocytes in yellow eels to early vitellogenic oocytes in silver eels. Both serum E2 and T concentrations significantly increased with ovarian development indicating a significant activation of steroidogenesis during silvering. In agreement with previous studies, significant increases in pituitary gonadotropin beta subunits FSH-β and LH-β transcripts were also measured by qPCR, supporting that the activation of pituitary gonadotropin expression is likely responsible for the significant ovarian development observed during silvering. We investigated for the first time the possible brain neuroendocrine mechanisms involved in the activation of the pituitary gonadotropic function during silvering. By analyzing the expression of genes representative of the stimulatory GnRH control and the inhibitory dopaminergic control. The transcript levels of mGnRH and the three GnRH receptors did not change in the brain and pituitary between yellow and silver stages, suggesting that gene expression of the GnRH system is not significantly activated during silvering. The brain transcript levels of tyrosine hydroxylase, limiting enzyme of DA synthesis did not change during silvering, indicating that the DA synthesis activity was maintained. In contrast, a significant decrease in DA-D2B receptor expression in the forebrain and pituitary was observed, with no changes in DA-D2A receptor. The decrease in the pituitary expression of DA-D2BR during silvering would allow a reduced inhibitory effect of DA. We may raise the hypothesis that this regulation of D2BR gene expression is one of the neuroendocrine mechanisms involved in the slight activation of the pituitary gonadotropin and gonadal activity that occur at silvering.

}, keywords = {Animals, Cells, Cultured, Dopamine, Eels, Female, Follicle Stimulating Hormone, beta Subunit, Gene Expression Regulation, Gonadotropin-Releasing Hormone, Immunoblotting, Immunoenzyme Techniques, Luteinizing Hormone, beta Subunit, Metamorphosis, Biological, Neurosecretory Systems, Oocytes, Ovary, Real-Time Polymerase Chain Reaction, Receptors, Dopamine D2, Reproduction, Reverse Transcriptase Polymerase Chain Reaction, RNA, Messenger, Sexual Maturation, Skin Pigmentation}, issn = {1095-6840}, doi = {10.1016/j.ygcen.2014.08.001}, author = {Jeng, Shan-Ru and Wen-Shiun Yueh and Pen, Yi-Ting and Lee, Yan-Horn and Chen, Guan-Ru and Sylvie Dufour and Chang, Ching-Fong} } @article {8450, title = {Validation of Eustiromastix guianae (Caporiacco, 1954) (Araneae, Salticidae) with a first description of the female, and additions to the salticid fauna of French Guiana.}, journal = {Zookeys}, year = {2014}, month = {2014}, pages = {11-8}, abstract = {

In this paper, we validate the doubtful species status of E. guianae, with redescriptions of (supposedly lost) type and holotype males, and a first description of the female. Both sexes are measured and illustrated by pictures of habitus and copulatory organs. Seventeen new salticid species for French Guiana are also reported and a detailed catalogue of all salticid species from the Trinit{\'e} National Nature Reserve is provided.

}, issn = {1313-2989}, doi = {10.3897/zookeys.420.6977}, author = {Courtial, Cyril and Picard, Lionel and Fr{\'e}d{\'e}ric Ysnel and P{\'e}tillon, Julien} } @article {8455, title = {First assessment of effects of global change on threatened spiders: Potential impacts on Dolomedes plantarius (Clerck) and its conservation plans}, journal = {Biological Conservation}, volume = {161}, year = {2013}, month = {Jan-05-2013}, pages = {155 - 163}, issn = {00063207}, doi = {10.1016/j.biocon.2013.03.022}, url = {https://linkinghub.elsevier.com/retrieve/pii/S000632071300089X}, author = {Leroy, Boris and Paschetta, Mauro and Canard, Alain and Bakkenes, Michel and Isaia, Marco and Fr{\'e}d{\'e}ric Ysnel} } @article {8461, title = {Optimization of an {\textquotedblleft}in situ{\textquotedblright} subtidal rocky-shore sampling strategy for monitoring purposes}, journal = {Marine Pollution Bulletin}, volume = {74}, year = {2013}, month = {Jan-09-2013}, pages = {253 - 263}, issn = {0025326X}, doi = {10.1016/j.marpolbul.2013.06.049}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0025326X1300355X}, author = {Gallon, R.K. and Fr{\'e}d{\'e}ric Ysnel and Eric Feunteun} } @article {8462, title = {Accuracy of pitfall traps for monitoring populations of the amphipod Orchestia gammarella (Pallas 1766) in saltmarshes}, journal = {Estuarine, Coastal and Shelf Science}, volume = {113}, year = {2012}, month = {Jan-11-2012}, pages = {314 - 316}, issn = {02727714}, doi = {10.1016/j.ecss.2012.07.022}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0272771412002922}, author = {Mantzouki, Evanthia and Fr{\'e}d{\'e}ric Ysnel and Alexandre Carpentier and P{\'e}tillon, Julien} } @proceedings {8579, title = {The Black stork at the Nazinga ranch (Burkina Faso)}, year = {2012}, month = {2016}, pages = {224}, publisher = {Ornithos}, edition = {Ornithos}, address = {Ch{\^a}lons-en-Champagne, France}, issn = {ORNITHOS 1254-2962}, author = {Yameogo, Dieudonn{\'e} and Chevallier, Damien and Brossault, Paul} } @article {8456, title = {Improving occurrence-based rarity metrics in conservation studies by including multiple rarity cut-off points}, journal = {Insect Conservation and Diversity}, volume = {5}, year = {2012}, month = {Jan-03-2012}, pages = {159 - 168}, doi = {10.1111/icad.2012.5.issue-210.1111/j.1752-4598.2011.00148.x}, url = {http://doi.wiley.com/10.1111/icad.2012.5.issue-2}, author = {Leroy, Boris and P{\'e}tillon, Julien and R{\'e}gis Gallon and Canard, Alain and Fr{\'e}d{\'e}ric Ysnel} } @article {7339, title = {Ontogenetic change in the lipid and fatty acid composition of scleractinian coral larvae}, journal = {Coral Reefs}, volume = {31}, year = {2012}, month = {Jan-06-2012}, pages = {613 - 619}, issn = {0722-4028}, doi = {10.1007/s00338-012-0874-3}, url = {http://link.springer.com/10.1007/s00338-012-0874-3}, author = {Figueiredo, J. and Baird, A. H. and Cohen, M. F. and Flot, J.-F. and Kamiki, T. and Tarik Meziane and Tsuchiya, M. and Yamasaki, H.} } @proceedings {8578, title = {Threats on the wintering grounds of migratory species in West Africa}, year = {2012}, month = {2016}, pages = {224}, publisher = {Ornithos}, edition = {Ornithos}, address = {Ch{\^a}lons-en-Champagne, France}, issn = {ORNITHOS 1254-2962}, author = {Chevallier, Damien and Brossault, Paul and Gendre, Nicolas and Baillon, Fran{\c c}ois and Duponnois, Robin and Chapalain, Fr{\'e}d{\'e}ric and Strenna, Luc and Yameogo, Dieudonn{\'e} and Le Maho, Yvon} } @article {8457, title = {Rehabilitation project of a managed marsh: Biodiversity assessment of different management measures}, journal = {Procedia Environmental Sciences}, volume = {9}, year = {2011}, month = {Jan-01-2011}, pages = {96 - 103}, issn = {18780296}, doi = {10.1016/j.proenv.2011.11.016}, url = {https://linkinghub.elsevier.com/retrieve/pii/S187802961100778X}, author = {Leroy, Boris and Morel, Lo{\"\i}s and Eybert, Marie-Christine and Fr{\'e}d{\'e}ric Ysnel and Georges, Anita} } @article {7889, title = {How Do Alterations in Habitat Structure by an Invasive Grass Affect Salt-Marsh Resident Spiders?}, journal = {Annales Zoologici Fennici}, volume = {47}, year = {2010}, month = {Jan-04-2010}, pages = {79 - 89}, issn = {0003-455X}, doi = {10.5735/086.047.0201}, url = {http://www.bioone.org/doi/abs/10.5735/086.047.0201}, author = {P{\'e}tillon, Julien and Lasne, Emilien and Lambeets, Kevin and Canard, Alain and Vernon, Philippe and Fr{\'e}d{\'e}ric Ysnel} } @article {7347, title = {Feeding deterrence of Azolla in relation to deoxyanthocyanin and fatty acid composition}, journal = {Aquatic Botany}, volume = {74}, year = {2002}, month = {Jan-10-2002}, pages = {181 - 187}, issn = {03043770}, doi = {10.1016/S0304-3770(02)00077-3}, url = {https://linkinghub.elsevier.com/retrieve/pii/S0304377002000773}, author = {Cohen, Michael F and Tarik Meziane and Tsuchiya, Makoto and Yamasaki, Hideo} }