Références

Fournier J (2015) Géographie et écologie du paysage. Dans: Pour une géographie de la conservation: Biodiversités, natures et sociétés, Raphaël Mathévet, Laurent Godet. L'Harmattan, Paris

Ch11_Fournier.pdf (224.76 Ko)

Rivière G, Klopp C, Ibouniyamine N, Huvet A, Boudry P, Favrel P (2015) GigaTON: an extensive publicly searchable database providing a new reference transcriptome in the pacific oyster Crassostrea gigas. BMC Bioinformatics 16:401

GigaTON.pdf (3.09 Mo)

Pelayo-Villamil P, Guisande C, Vari RP, Manjarrez-HernÃ¡ndez A, Garcia-Rosello E, Gonzalez-Dacosta J, Heine J, Vilas LGonzalez, Patti B, Quinci EMaria, Jimenez LFernanda, Granado-Lorencio C, Tedesco PA, Lobo JM (2015) Global diversity patterns of freshwater fishes - potential victims of their own success. Diversity and Distributions 21:345–356

Baillon L, Oses J, Pierron F, Colombier SBureau du, Caron A, Normandeau E, Lambert P, Couture P, Labadie P, Budzinski H, Dufour S, Bernatchez L, Baudrimont M (2015) Gonadal transcriptome analysis of wild contaminated female European eels during artificial gonad maturation. Chemosphere 139:303-309

Baillon_Chemosphere2015.pdf (490.11 Ko)

Darias M, Gómez MA, Tello S, Gisbert E (2015) Growth, survival and the histology of the digestive tract of juvenile Osteoglossum bicirrhosum (Cuvier, 1829) fed three diets containing different protein and lipid levels. Journal of Applied Ichthyology 31:67–73

2014

Fournier J, Gallon RK, Paris R (2014) G2Sd: a new R package for the statistical analysis of unconsolidated sediments. Géomorphologie: relief, processus, environnement:73-78

Carvajal-Vallejos FM, Duponchelle F, Desmarais E, Cerqueira F, Querouil S, Nuñez J, García C, Renno J-F (2014) Genetic structure in the Amazonian catfish Brachyplatystoma rousseauxii: influence of life history strategies. Genetica 142:323-36

Genetic structure in the Amazonian catfish Brachyplatystoma rousseauxii- influence of life history strategies.pdf (1008.87 Ko)

Pouilly M, Point D, Sondag F, Henry M, Santos RV (2014) Geographical origin of Amazonian freshwater fishes fingerprinted by ⁸⁷Sr/⁸⁶Sr ratios on fish otoliths and scales. Environ Sci Technol 48:8980-7

Dias MS, Oberdorff T, Hugueny B, Leprieur F, Jézéquel C, Cornu J-F, Brosse S, Grenouillet G, Tedesco P (2014) Global imprint of historical connectivity on freshwater fish biodiversity. Ecol Lett 17:1130-40

Datry T, Corti R, Belletti B, Piégay H (2014) Ground-dwelling arthropod community across braided landscape mosaics: a Mediterraen perspective. Freshwater Biology 59:1308-1322

2013

Gallon R, Fournier J (2013) G2Sd 2.0 Grain-size statistics and description of sediment.

Martenot C, Travaillé E, Lethuillier O, Lelong C, Houssin M (2013) Genome exploration of six variants of the Ostreid Herpesvirus 1 and characterization of large deletion in OsHV-1μVar specimens. Virus Res 178:462-70

Collén J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K, Elias M, Artiguenave F, Arun A, Aury J-M, Barbosa-Neto JF, Bothwell JH, Bouget F-Y, Brillet L, Cabello-Hurtado F, Capella-Gutiérrez S, Charrier B, Cladière L, J Cock M, Coelho SM, Colleoni C, Czjzek M, Da Silva C, Delage L, Denoeud F, Deschamps P, Dittami SM, Gabaldón T, Gachon CMM, Groisillier A, Hervé C, Jabbari K, Katinka M, Kloareg B, Kowalczyk N, Labadie K, Leblanc C, Lopez PJ, McLachlan DH, Meslet-Cladiere L, Moustafa A, Nehr Z, Collén PNyvall, Panaud O, Partensky F, Poulain J, Rensing SA, Rousvoal S, Samson G, Symeonidi A, Weissenbach J, Zambounis A, Wincker P, Boyen C (2013) Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proc Natl Acad Sci U S A 110:5247-52

PNAS-2013-Collén-1221259110.pdf (1000.73 Ko)

Hudson AG, Vonlanthen P, Bezault E, Seehausen O (2013) Genomic signatures of relaxed disruptive selection associated with speciation reversal in whitefish. BMC Evol Biol 13:108

Tisseuil C, Cornu J-F, Beauchard O, Brosse S, Darwall W, Holland R, Hugueny B, Tedesco P, Oberdorff T (2013) Global diversity patterns and cross-taxa convergence in freshwater systems. J Anim Ecol 82:365-76

2012

Régis G, Fournier J (2012) G2Sd, Grain-size statistics and description of sediment. R-project, Vienna, Austria

Dheilly NM, Lelong C, Huvet A, Kellner-Cousin K, Dubos M-P, Rivière G, Boudry P, Favrel P (2012) Gametogenesis in the Pacific Oyster Crassostrea gigas : a microarrays-based analysis identifies sex and stage specific genes. Plos One

Mazurais D, Darias M, Fernández I, Cahu CL, Gisbert E, Zambonino-Infante J (2012) Gene Expression Pattern during European Sea Bass Larvae Development: Impact of Dietary Vitamins.. Dans: Saroglia M, Liu ZJ (éd) Functional Genomics in Aquaculture. John Wiley & Sons, Oxford, p 91-111

Marriner N, Pirazzoli PA, Fontugne M, Guérout M, Guillaume M, Reyss J-L (2012) A geomorphological reconnaissance of Tromelin Island, Indian Ocean. Journal of Coastal Research 28:1606–1616

Kerambrun E, Henry F, Perrichon P, Courcot L, Meziane T, Spilmont N, Amara R (2012) Growth and condition indices of juvenile turbot, Scophthalmus maximus , exposed to contaminated sediments: Effects of metallic and organic compounds. Aquatic Toxicology 108:130–140

2011

Rosic NN, Pernice M, Dove S, Dunn SR, Hoegh-Guldberg O (2011) Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: possible implications for coral bleaching. Cell Stress & Chaperones 16:69–80

Martin PRueda, Gibon F-M, Molina CIsrael (2011) The genus Oecetis McLachlan in Bolivia and northwestern Argentina (Trichoptera: Leptoceridae), with new species and identification key for males of Oecetis species from Mexico, Central and South America. Zootaxa:19–38

Oberdorff T, Tedesco P, Hugueny B, Leprieur F, Beauchard O, Brosse S, Durr HH (2011) Global and Regional Patterns in Riverine Fish Species Richness: A Review. International Journal of Ecology 2011

Heude-Berthelin C, Hégron-Macé L, Legrand V, Jouaux A, Adeline B, Mathieu M, Kellner-Cousin K (2011) Growth and reproduction of the common whelk Buccinum undatum in west Cotentin (Channel), France. Aquat. Living Resour 24:317–327

Gautier A, Le Gac F, Lareyre J-J (2011) The gsdf gene locus harbors evolutionary conserved and clustered genes preferentially expressed in fish previtellogenic oocytes. Gene 472:7-17

2010

Jouaux A, Heude-Berthelin C, Sourdaine P, Mathieu M, Kellner-Cousin K (2010) Gametogenic stages in triploid oysters Crassostrea gigas: irregular locking of gonial proliferation and subsequent reproductive effort. Journal of Experimental Marine Biology and Ecology 395:162–170

Buffler RT, J Bruggemann H, Ghebretensae BN, Walter RC, Guillaume M, Berhe SM, McIntosh W, Park LE (2010) Geologic setting of the Abdur Archaeological Site on the Red Sea coast of Eritrea, Africa. Global and Planetary Change 72

2009

Chu-Koo F, Dugué R, M Aguilar A, A Daza C, F Bocanegra A, C Veintemilla C, Duponchelle F, Renno J-F, Tello S, Nuñez J (2009) Gender determination in the Paiche or Pirarucu (Arapaima gigas) using plasma vitellogenin, 17beta-estradiol, and 11-ketotestosterone levels. Fish Physiol Biochem 35:125-36

Gender determination in the Paiche or Pirarucu (Arapaima gigas) using plasma vitellogenin, 17b-estradiol, and 11-ketotestosterone levels.pdf (571.67 Ko)

Fleury E, Huvet A, Lelong C, de Lorgeril J, Boulo V, Gueguen Y, Bachère E, Tanguy A, Moraga D, Fabioux C, Lindeque P, Shaw J, Reinhardt R, Prunet P, Davey G, Lapègue S, Sauvage C, Corporeau C, Moal J, Gavory F, Wincker P, Moreews F, Klopp C, Mathieu M, Boudry P, Favrel P (2009) Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase. BMC Genomics 10:341

Fleury E, Huvet A, Lelong C, De Lorgeril J, Boulo V, Gueguen Y, Bachère E, Tanguy A, Moraga D, Fabioux C, Lindeque P, Shaw J, Reinhardt R, Prunet P, Davey G, Lapegue S, Sauvage C, Corporeau C, Moal J, Gavory F, Wincker P, Moreews F, Klopp C, Mathieu M, Boudry P, Favrel P (2009) Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase. BMC Genomics 10:341

Denis F, Ravallec R, Pavillon JF, Van Wormhoudt A (2009) Genetic differentiation of Atlantic populations of the intertidal copepod Tigriopus brevicornis. Scientia Marina 73:579–587

Sapriel G, Quinet M, Heijde M, Jourdren L, Tanty V, Luo GZ, Le Crom S, Lopez PJ (2009) Genome-Wide Transcriptome Analyses of Silicon Metabolism in Phaeodactylum tricornutum Reveal the Multilevel Regulation of Silicic Acid Transporters. Plos One 4

Roux M, Ameziane N, Eleaume M (2009) The genus Teliocrinus (Crinoidea, Echinodermata): a key taxon among pentacrinid stalked crinoids. Zoological Journal of the Linnean Society 155:22–39

Gaubert P, Denys G, Oberdorff T (2009) Genus-level supertree of Cyprinidae (Actinopterygii: Cypriniformes), partitioned qualitative clade support and test of macro-evolutionary scenarios. Biological Reviews 84

2008

Royer J, Seguineau C, Park K-I, Pouvreau S, Choi K-S, Costil K (2008) Gametogenetic cycle and reproductive effort assessed by two methods in 3 age classes of Pacific oysters, Crassostrea gigas, reared in Normandy. Aquaculture 277:313–320

Darias M, Zambonino-Infante J, Hugot K, Cahu CL, Mazurais D (2008) Gene expression patterns during the larval development of European sea bass (dicentrarchus labrax) by microarray analysis. Mar Biotechnol (NY) 10:416-28

Boxshall GA, Defaye D (2008) Global diversity of copepods (Crustacea : Copepoda) in freshwater. Hydrobiologia 595

Leveque C, Oberdorff T, Paugy D, Stiassny MLJ, Tedesco P (2008) Global diversity of fish (Pisces) in freshwater. Hydrobiologia 595:545–567

2007

Samain J-F, Dégremont L, Soletchnik P, Haure J, Bedier E, Ropert M, Moal J, Huvet A, Bacca H, Van Wormhoudt A, Delaporte M, Costil K, Pouvreau S, Lambert C, Boulo V, Soudant P, Nicolas JL, Le Roux F, Renault T, Gagnaire B, Geret F, Boutet I, Burgeot T, Boudry P (2007) Genetically based resistance to summer mortality in the Pacific oyster (Crassostrea gigas) and its relationship with physiological, immunological characteristics and infection processes. Aquaculture 268:227-243

Samain et al. 2007.pdf (174.19 Ko)

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