Software - Packages written by BOREA

Biogeographical regions of freshwater fishes

biogeonetworks is an R package that implements several functions to write, read and analyse biogeographical networks for bioregionalization analyses. It is primarily designed to work with the Map Equation algorithm (infomap) and with the Gephi...

Taxon-specific rarity thresholds

The Rarity R package provides metrics to quantify rarity of species and communities of species. It has been developed to improve the existing methods by integrating the biogeographical concepts of rarity. This package includes metrics that have a...

Illustration of the virtualspecies framework

The virtualspecies package is a freely available package for R designed to generate virtual species distributions, a procedure increasingly used in ecology to improve species distribution models. This package provides a framework for integrating...