Cédric HUBAS
Cédric HUBAS
MNHN Paris
Assistant professor
The French National Museum of Natural History (MNHN)
SOMAQUA
Management committee
Headers
02 98 50 99 33
Statutaire
General topics
My research focuses on understanding the functioning of microbial communities. This question is adressed by focusing on the following two themes:
1 / Diversity and functioning of biofilms and microbial mats: mainly in aquatic ecosystems (freshwater and marine). I am mainly interested in coastal ecosystems with a real preference for the intertidal area.
2 / Interactions in microbial ecosystems: between microorganisms (communication, ...) or between a host and a microbe (symbiosis, ...)
Teaching
I teach mainly in ecology and statistics (univariate and multivariate) at the Museum of Natural History and other institutions/universities. I am also part of the ICTs in education (information and communication technologies) committee of the museum of natural history and manage the e-learning platform (http://plateforme-depf.mnhn.fr).
Curator tasks
I am curator of the meiofauna (http://www.mnhn.fr/fr/collections/ensembles-collections/invertebres-marins/meiofaune) and sipunculide collections. The meiofauna collection is composed of about 800 different species mounted on about 3000 glass slides. This collection is composed by 8 different phyla (Annelida, Gastrotricha, Kinorhyncha, Loricifera, Nematoda, Platyhelminthes, Rotifera, Tardigrada).
Gallery
My Papers
2020
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. 2020. “Effect Of Light Intensity And Light Quality On Diatom Behavioral And Physiological Photoprotection”. Frontiers In Marine Science 7: 203. doi:10.3389/fmars.2020.00203. https://www.frontiersin.org/article/10.3389/fmars.2020.00203.
fmars-07-00203.pdf (3.58 MB) -
. 2020. “An Untargeted Metabolomic Approach For Microphytobenthic Biofilms In Intertidal Mudflats”. Frontiers In Marine Science 7: 250. doi:10.3389/fmars.2020.00250. https://www.frontiersin.org/article/10.3389/fmars.2020.00250. fmars-07-00250.pdf (2.41 MB)
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. 2020. “Relationship Between Bacterial Compartment And Particulate Organic Matter (Pom) In Coastal Systems: An Assessment Using Fatty Acids And Stable Isotopes”. Estuarine, Coastal And Shelf Science 239: 106720. doi:10.1016/j.ecss.2020.106720. https://linkinghub.elsevier.com/retrieve/pii/S0272771419301593.
2019
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. 2019. “Bacterial–Fungal Interactions In The Kelp Endomicrobiota Drive Autoinducer-2 Quorum Sensing”. Frontiers In Microbiology 10: 1693. doi:10.3389/fmicb.2019.01693. https://www.frontiersin.org/article/10.3389/fmicb.2019.01693. fmicb-10-01693.pdf (3.74 MB)
2018
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. 2018. “Diel Rhythm Does Not Shape The Vertical Distribution Of Bacterial And Archaeal 16S Rrna Transcript Diversity In Intertidal Sediments: A Mesocosm Study”. Microbial Ecology 75 (2): 364-374. doi:10.1007/s00248-017-1048-1. https://doi.org/10.1007/s00248-017-1048-1. Lavergne et al 2017-Microbial Eoclogy-ONLINE-VERSION-2017-08-04.pdf (1.42 MB)
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. 2018. “Strengths, Weaknesses, And Opportunities Of French Research In Trophic Ecology”. Comptes Rendus Biologies: -. doi:https://doi.org/10.1016/j.crvi.2018.05.001. https://www.sciencedirect.com/science/article/pii/S1631069118300830. 1-s2.0-S1631069118300830-main-2.pdf (2.34 MB)
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. 2018. “Biofilm Monitoring As A Tool To Assess The Efficiency Of Artificial Reefs As Substrates: Toward 3D Printed Reefs”. Ecological Engineering 120: 230 - 237. doi:https://doi.org/10.1016/j.ecoleng.2018.06.005. https://www.sciencedirect.com/science/article/pii/S0925857418302167. 2018.Riera et al.pdf (597.83 KB)
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. 2018. “Microphytobenthic Biofilms: Composition And Interactions”. In Mudflat Ecology, 63–90. Cham: Springer International Publishing. doi:10.1007/978-3-319-99194-8_4. https://doi.org/10.1007/978-3-319-99194-8_4.
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. 2018. “Mudflat Ecosystem Engineers And Services”. In Mudflat Ecology, 243–269. Cham: Springer International Publishing. doi:10.1007/978-3-319-99194-8_10. https://doi.org/10.1007/978-3-319-99194-8_10.
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. 2018. “Chemically-Mediated Interactions Between Macroalgae, Their Fungal Endophytes, And Protistan Pathogens”. Frontiers In Microbiology 9: 3161. doi:10.3389/fmicb.2018.03161. https://www.frontiersin.org/article/10.3389/fmicb.2018.03161. fmicb-09-03161.pdf (2.4 MB)
2017
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. 2017. “Physiological Adjustments And Transcriptome Reprogramming Are Involved In The Acclimation To Salinity Gradients In Diatoms”. Environmental Microbiology 19 (3): 909-925. doi:10.1111/1462-2920.13398. http://dx.doi.org/10.1111/1462-2920.13398.
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. 2017. “The Impact Of Suspended Oyster Farming On Nitrogen Cycling And Nitrous Oxide Production In A Sub-Tropical Australian Estuary”. Estuarine, Coastal And Shelf Science 192: 117 - 127. doi:http://dx.doi.org/10.1016/j.ecss.2017.05.007. http://www.sciencedirect.com/science/article/pii/S0272771417301592. 1-s2.0-S0272771417301592-main.pdf (1.18 MB)
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. 2017. “A Nanoscale Study Of Carbon And Nitrogen Fluxes In Mats Of Purple Sulfur Bacteria: Implications For Carbon Cycling At The Surface Of Coastal Sediments”. Frontiers In Microbiology 8: 1995. doi:10.3389/fmicb.2017.01995. https://www.frontiersin.org/articles/10.3389/fmicb.2017.01995/abstract.
2016
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. 2016. “Geographic Variation In Stable Isotopic And Fatty Acid Composition Of Anguilliform Leptocephali And Particulate Organic Matter In The South Pacific”. Marine Ecology And Progress Series 544: 225-241.
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. 2016. “The Fate Of C4 And C3 Macrophyte Carbon In Central Amazon Floodplain Waters: Insights From A Batch Experiment”. Limnologica - Ecology And Management Of Inland Waters 59: 90-98. doi:doi:10.1016/j.limno.2016.03.008. Mortilaro_et_al_2016_limnologica.pdf (1.93 MB)
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. 2016. “Meiofauna Distribution In A Mangrove Forest Exposed To Shrimp Farm Effluents (New Caledonia)”. Marine Environmental Research 119: 100 - 113. doi:http://dx.doi.org/10.1016/j.marenvres.2016.05.028. http://www.sciencedirect.com/science/article/pii/S0141113616300976. patrona2016.pdf (1.45 MB)
2015
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. 2015. “Relationships Between Biodiversity And The Stability Of Marine Ecosystems: Comparisons At A European Scale Using Meta-Analysis”. Journal Of Sea Research 98: 5-14. doi:http://dx.doi.org/10.1016/j.seares.2014.08.004. http://www.sciencedirect.com/science/article/pii/S1385110114001609. 1-s2.0-S1385110114001609-main.pdf (694.37 KB)
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. 2015. “Spatio-Temporal Variations In The Composition Of Organic Matter In Surface Sediments Of A Mangrove Receiving Shrimp Farm Effluents (New Caledonia)”. Science Of The Total Environment 512–513: 296 - 307. doi:http://dx.doi.org/10.1016/j.scitotenv.2014.12.082. http://www.sciencedirect.com/science/article/pii/S0048969714017938. Aschenbroich et al. 2015.pdf (1.96 MB)
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. 2015. “Seasonal Variations Of The Composition Of Microbial Biofilms In Sandy Tidal Flats: Focus Of Fatty Acids, Pigments And Exopolymers”. Estuarine, Coastal And Shelf Science 153: 29 - 37. doi:http://dx.doi.org/10.1016/j.ecss.2014.11.013. http://www.sciencedirect.com/science/article/pii/S0272771414003412. 1-s2.0-S0272771414003412-main.pdf (627.45 KB)
2014
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. 2014. “Organisms As Cooperative Ecosystem Engineers In Intertidal Flats”. Journal Of Sea Research 92: 92-101. doi:10.1016/j.seares.2013.07.010. Passarelli_et_al_2014.pdf (1.18 MB)