Cédric HUBAS

General topics

My research focuses on understanding the functioning of microbial communities. This question is adressed by focusing on the following two themes:

1 / Diversity and functioning of biofilms and microbial mats: mainly in aquatic ecosystems (freshwater and marine). I am mainly interested in coastal ecosystems with a real preference for the intertidal area.

2 / Interactions in microbial ecosystems: between microorganisms (communication, ...) or between a host and a microbe (symbiosis, ...)

Teaching

I teach mainly in ecology and statistics (univariate and multivariate) at the Museum of Natural History and other institutions/universities. I am also part of the ICTs in education (information and communication technologies) committee of the museum of natural history and manage the e-learning platform (http://plateforme-depf.mnhn.fr).

Curator tasks

I am curator of the meiofauna (http://www.mnhn.fr/fr/collections/ensembles-collections/invertebres-marins/meiofaune) and sipunculide collections. The meiofauna collection is composed of about 800 different species mounted on about 3000 glass slides. This collection is composed by 8 different phyla (Annelida, Gastrotricha, Kinorhyncha, Loricifera, Nematoda, Platyhelminthes, Rotifera, Tardigrada).

Gallery

My Papers

2020

Liénart, Camilla , Nicolas Savoye, Pascal Conan, Valérie David, Pierrick Barbier, Sabrina Bichon, Karine Charlier, et al.. 2020. “Relationship Between Bacterial Compartment And Particulate Organic Matter (Pom) In Coastal Systems: An Assessment Using Fatty Acids And Stable Isotopes”. Estuarine, Coastal And Shelf Science 239: 106720. doi:10.1016/j.ecss.2020.106720. https://linkinghub.elsevier.com/retrieve/pii/S0272771419301593.
Prins, Antoine , Paul Deleris, Cédric Hubas, and Bruno Jesus. 2020. “Effect Of Light Intensity And Light Quality On Diatom Behavioral And Physiological Photoprotection”. Frontiers In Marine Science 7: 203. doi:10.3389/fmars.2020.00203. https://www.frontiersin.org/article/10.3389/fmars.2020.00203.
fmars-07-00203.pdf (3.58 MB)
Gaubert-Boussarie, Julie , Soizic Prado, and Cédric Hubas. 2020. “An Untargeted Metabolomic Approach For Microphytobenthic Biofilms In Intertidal Mudflats”. Frontiers In Marine Science 7: 250. doi:10.3389/fmars.2020.00250. https://www.frontiersin.org/article/10.3389/fmars.2020.00250.
fmars-07-00250.pdf (2.41 MB)
Cruz, Sónia , Charlotte LeKieffre, Paulo Cartaxana, Cédric Hubas, Najet Thiney, Sofie Jakobsen, Stéphane Escrig, et al.. 2020. “Functional Kleptoplasts Intermediate Incorporation Of Carbon And Nitrogen In Cells Of The Sacoglossa Sea Slug Elysia Viridis”. Scientific Reports 10 (1). doi:10.1038/s41598-020-66909-7. http://www.nature.com/articles/s41598-020-66909-7.
s41598-020-66909-7.pdf (8.23 MB)
Vallet, Marine , Tarik Meziane, Najet Thiney, Soizic Prado, and Cédric Hubas. 2020. “Laminariales Host Does Impact Lipid Temperature Trajectories Of The Fungal Endophyte Paradendryphiella Salina (Sutherland.)”. Marine Drugs 18: 379. doi:10.3390/md18080379. https://www.mdpi.com/1660-3397/18/8/379.
marinedrugs-18-00379.pdf (744.42 KB)
David, Frank , Cédric Hubas, Helène Laguerre, Aicha Badou, Gwen Herault, Théo Bordelet, and Nadia Ameziane. 2020. “Food Sources, Digestive Efficiency And Resource Allocation In The Sea Cucumber Holothuria Forskali (Echinodermata: Holothuroidea): Insights From Pigments And Fatty Acids”. Aquaculture Nutrition 26 (5): 1568-1583. doi:10.1111/anu.13103. https://onlinelibrary.wiley.com/doi/abs/10.1111/anu.13103.
Androuin, Thibault , Stanislas Dubois, Cédric Hubas, Gwendoline Lefebvre, Fabienne Le Grand, Gauthier Schaal, and Antoine Carlier. 2020. “Trophic Niche Of The Invasive Gregarious Species Crepidula Fornicata, In Relation To Ontogenic Changes”. Biorxiv. doi:10.1101/2020.07.30.229021. https://www.biorxiv.org/content/10.1101/2020.07.30.229021v1.abstract.
Vallet, Marine , Yee-Meng Chong, Anne Tourneroche, Gregory Genta-Jouve, Cédric Hubas, Raphaël Lami, Claire MM Gachon, Tatyana Klochkova, Kok-Gan Chan, and Soizic Prado. 2020. “Novel Α-Hydroxy Γ-Butenolides Of Kelp Endophytes Disrupt Bacterial Cell-To-Cell Signalingdata_Sheet_1.docx”. Frontiers In Marine Science 7. doi:10.3389/fmars.2020.0060110.3389/fmars.2020.00601.s001. https://www.frontiersin.org/article/10.3389/fmars.2020.00601/full.
Monti, Dominique , Cédric Hubas, Xavier Lourenço, Farid Begarin, Alexandre Haouisée, Laurence Romana, Estelle Lefrançois, et al.. 2020. “Physical Properties Of Epilithic River Biofilm As A New Lead To Perform Pollution Bioassessments In Overseas Territories”. Scientific Reports 10 (1). doi:10.1038/s41598-020-73948-7. http://www.nature.com/articles/s41598-020-73948-7.
s41598-020-73948-7.pdf (5.19 MB)

2019

Tourneroche, Anne , Raphaël Lami, Cédric Hubas, Elodie Blanchet, Marine Vallet, Karine Escoubeyrou, Alain Paris, and Soizic Prado. 2019. “Bacterial–Fungal Interactions In The Kelp Endomicrobiota Drive Autoinducer-2 Quorum Sensing”. Frontiers In Microbiology 10: 1693. doi:10.3389/fmicb.2019.01693. https://www.frontiersin.org/article/10.3389/fmicb.2019.01693.
fmicb-10-01693.pdf (3.74 MB)

2018

Hubas, Cédric , C Passarelli, and David M Paterson. 2018. “Microphytobenthic Biofilms: Composition And Interactions”. In Mudflat Ecology, 63–90. Cham: Springer International Publishing. doi:10.1007/978-3-319-99194-8_4. https://doi.org/10.1007/978-3-319-99194-8_4.
Passarelli, C , Cédric Hubas, and David M Paterson. 2018. “Mudflat Ecosystem Engineers And Services”. In Mudflat Ecology, 243–269. Cham: Springer International Publishing. doi:10.1007/978-3-319-99194-8_10. https://doi.org/10.1007/978-3-319-99194-8_10.
Vallet, Marine , Martina Strittmatter, Pedro Murúa, Sandrine Lacoste, Joëlle Dupont, Cédric Hubas, Gregory Genta-Jouve, Claire MM Gachon, Gwang Hoon Kim, and Soizic Prado. 2018. “Chemically-Mediated Interactions Between Macroalgae, Their Fungal Endophytes, And Protistan Pathogens”. Frontiers In Microbiology 9: 3161. doi:10.3389/fmicb.2018.03161. https://www.frontiersin.org/article/10.3389/fmicb.2018.03161.
fmicb-09-03161.pdf (2.4 MB)
Androuin, Thibault , Lubos Polerecky, Priscilla Decottignies, Stanislas F Dubois, Christine Dupuy, Cédric Hubas, Bruno Jesus, Erwan Le Gall, Martin P Marzloff, and Antoine Carlier. 2018. “Subtidal Microphytobenthos: A Secret Garden Stimulated By The Engineer Species Crepidula Fornicata”. Frontiers In Marine Science 5. doi:10.3389/fmars.2018.00475. https://www.frontiersin.org/article/10.3389/fmars.2018.00475/full.
Lavergne, C. , M. Hugoni, Cédric Hubas, D. Debroas, Christine Dupuy, and H. Agogué. 2018. “Diel Rhythm Does Not Shape The Vertical Distribution Of Bacterial And Archaeal 16S Rrna Transcript Diversity In Intertidal Sediments: A Mesocosm Study”. Microbial Ecology 75 (2): 364-374. doi:10.1007/s00248-017-1048-1. https://doi.org/10.1007/s00248-017-1048-1.
Lavergne et al 2017-Microbial Eoclogy-ONLINE-VERSION-2017-08-04.pdf (1.42 MB)
Perga, Marie-Elodie , Michael Danger, Stanislas Dubois, Clémentine Fritch, Cédric Gaucherel, Cédric Hubas, Franck Jabot, et al.. 2018. “Strengths, Weaknesses, And Opportunities Of French Research In Trophic Ecology”. Comptes Rendus Biologies: -. doi:https://doi.org/10.1016/j.crvi.2018.05.001. https://www.sciencedirect.com/science/article/pii/S1631069118300830.
1-s2.0-S1631069118300830-main-2.pdf (2.34 MB)
Riera, Elisabeth , Dominique Lamy, Christophe Goulard, P Francour, and Cédric Hubas. 2018. “Biofilm Monitoring As A Tool To Assess The Efficiency Of Artificial Reefs As Substrates: Toward 3D Printed Reefs”. Ecological Engineering 120: 230 - 237. doi:https://doi.org/10.1016/j.ecoleng.2018.06.005. https://www.sciencedirect.com/science/article/pii/S0925857418302167.
2018.Riera et al.pdf (597.83 KB)

2017

Bussard, Adrien , Erwan Corre, Cédric Hubas, Evelyne Duvernois‐Berthet, Gildas Le Corguille, Laurent Jourdren, Fanny Coulpier, Pascal Claquin, and Pascal Jean Lopez. 2017. “Physiological Adjustments And Transcriptome Reprogramming Are Involved In The Acclimation To Salinity Gradients In Diatoms”. Environmental Microbiology 19 (3): 909-925. doi:10.1111/1462-2920.13398. http://dx.doi.org/10.1111/1462-2920.13398.
Erler, Dirk V, David T Welsh, William W Bennet, Tarik Meziane, Cédric Hubas, Daniele Nizzoli, and Angus JP Ferguson. 2017. “The Impact Of Suspended Oyster Farming On Nitrogen Cycling And Nitrous Oxide Production In A Sub-Tropical Australian Estuary”. Estuarine, Coastal And Shelf Science 192: 117 - 127. doi:http://dx.doi.org/10.1016/j.ecss.2017.05.007. http://www.sciencedirect.com/science/article/pii/S0272771417301592.
1-s2.0-S0272771417301592-main.pdf (1.18 MB)
Hubas, Cédric , Dominique Boeuf, Bruno Jesus, Najet Thiney, Yann Bozec, and Christian Jeanthon. 2017. “A Nanoscale Study Of Carbon And Nitrogen Fluxes In Mats Of Purple Sulfur Bacteria: Implications For Carbon Cycling At The Surface Of Coastal Sediments”. Frontiers In Microbiology 8: 1995. doi:10.3389/fmicb.2017.01995. https://www.frontiersin.org/articles/10.3389/fmicb.2017.01995/abstract.

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