Cédric HUBAS
My research focuses on the understanding of the functioning of microbial communities. I address this question by organizing my work around the following two themes:
1/ Diversity and functioning of biofilms and microbial mats: mainly in aquatic ecosystems (freshwater and marine). I am mainly interested in coastal ecosystems with a clear preference for the tidal zone. I study the diversity of microorganisms in these biofilms and their role in the functioning of ecosystems.
2/ Interactions in microbial ecosystems: between microorganisms (communication, ...) or between a host and a microorganism (symbiosis, ...)
I teach mainly in ecology and statistics (univariate and multivariate) at the Museum of Natural History and other institutions/universities. I am responsible for the optional module TC3-ini: Introduction to Statistics and Probability (http://plateforme-depf.mnhn.fr/course/view.php?id=57).
I perform experiments for outreach purposes. Below is an experiment to document the changes observed in a Winogradsky column. The high resolution version of this poster is available for download at the following address: 
I am in charge of the meiofauna (http://www.mnhn.fr/fr/collections/ensembles-collections/invertebres-mari...) and siponcle collections.
The meiofauna collection gathers nearly 800 different species (and as many types) on slides, corresponding to more than 3000 microscopic preparations, the inventory of which is computerized with JACIM. This collection includes 8 different phyla (Annelida, Gastrotricha, Kinorhyncha, Loricifera, Nematoda, Platyhelminthes, Rotifera, Tardigrada) and is accompanied by an important library on various groups living in the interstitial environment.
I have been participating in the Water Framework Directive (WFD) "mangrove" working group since 2016. The aim of the working group is to respond to requests from the Ministry and the French Biodiversity Office (OFB) regarding the definition of indicators of good ecological status for coastal mangroves.
- Responsible for EU ES10 and TC3-ini
- Co-leader of the Somaqua team
- Scientific manager of the MEB-FEG department of the Concarneau Marine Station
Gallery
My Papers
2024
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. 2024. “The Metabolites Of Light: Untargeted Metabolomic Approaches Bring New Clues To Understand Light-Driven Acclimation Of Intertidal Mudflat Biofilm”. Science Of The Total Environment 912: 168692. doi:10.1016/j.scitotenv.2023.168692. https://linkinghub.elsevier.com/retrieve/pii/S0048969723073205.
v2_covered_5c0f4269-6c03-4c76-b23f-6f5f1ddb682a.pdf (851.65 KB) -
. 2024. “Deciphering Environmental Forcings In The Distribution Of Meiofauna And Nematodes In Mangroves Of The Atlantic-Caribbean-East Pacific And Indo-West Pacific Regions”. Science Of The Total Environment 930: 172612. doi:10.1016/j.scitotenv.2024.172612. https://www-sciencedirect-com.inee.bib.cnrs.fr/science/article/pii/S004896972402758X?via%3Dihub.
2023
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. 2023. “Sex-Specific Seasonal Variations In The Fatty Acid And Carotenoid Composition Of Sea Cucumber Gonads And Implications For Aquaculture”. Marine Biology 170 (4). doi:10.1007/s00227-023-04198-0. https://link.springer.com/10.1007/s00227-023-04198-0.
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. 2023. “Artificial Reef Effectiveness Changes Among Types As Revealed By Underwater Hyperspectral Imagery”. Restoration Ecology: e13978. doi:10.1111/rec.13978. https://onlinelibrary.wiley.com/doi/10.1111/rec.13978.
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. 2023. “Identification Of Microbial Exopolymer Producers In Sandy And Muddy Intertidal Sediments By Compound-Specific Isotope Analysis”. Peer Community Journal 3. doi:10.24072/pcjournal.336. https://peercommunityjournal.org/articles/10.24072/pcjournal.336/. 10_24072_pcjournal_336 (1).pdf (3.11 MB)
2022
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. 2022. “Mangrove Microbiota Along The Urban-To-Rural Gradient Of The Cayenne Estuary (French Guiana, South America): Drivers And Potential Bioindicators”. Science Of The Total Environment 807: 150667. doi:10.1016/j.scitotenv.2021.150667. https://linkinghub.elsevier.com/retrieve/pii/S0048969721057454.
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. 2022. “The Response Of Microphytobenthos To Physical Disturbance, Herbicide, And Titanium Dioxide Nanoparticle Exposure”. Marine Pollution Bulletin 185: 114348. doi:10.1016/j.marpolbul.2022.114348. https://linkinghub.elsevier.com/retrieve/pii/S0025326X2201030X.
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. 2022. “Climate Change Influences Chlorophylls And Bacteriochlorophylls Metabolism In Hypersaline Microbial Mat”. Science Of The Total Environment 802: 149787. doi:10.1016/j.scitotenv.2021.149787. https://linkinghub.elsevier.com/retrieve/pii/S0048969721048622.
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. 2022. “Chlordecone-Contaminated Epilithic Biofilms Show Increased Adsorption Capacities”. Science Of The Total Environment 825: 153942. doi:10.1016/j.scitotenv.2022.153942. https://linkinghub.elsevier.com/retrieve/pii/S0048969722010348.
2021
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. 2021. “Trophic Niche Of The Invasive Gregarious Species Crepidula Fornicata, In Relation To Ontogenic Changes”. Biorxiv: 2020.07.30.229021. doi:10.1101/2020.07.30.229021. https://www.biorxiv.org/content/10.1101/2020.07.30.229021v1.abstract. Androuin_et_al_2020.pdf (2.4 MB)
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. 2021. “First Assessment Of The Benthic Meiofauna Sensitivity To Low Human-Impacted Mangroves In French Guiana”. Forests 12 (3): 338. doi:10.3390/f12030338. https://www.mdpi.com/1999-4907/12/3/338.
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. 2021. “Environmental Heterogeneity Drives Phytoplankton Community Assembly Patterns In A Tropical Riverine System”. Peer Community In Ecology. doi:10.24072/pci.ecology.100083. https://ecology.peercommunityin.org/articles/rec?id=86.
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. 2021. “Towards A Better Understanding Of The Effects Of Self-Shading On Fucus Serratus Populations”. Peer Community In Ecology. doi:10.24072/pci.ecology.100086. https://ecology.peercommunityin.org/.
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. 2021. “Upstream/Downstream Food Quality Differences In A Caribbean Island River”. Aquatic Ecology. doi:10.1007/s10452-021-09887-w. https://link.springer.com/10.1007/s10452-021-09887-w. Frotté2021_Article_UpstreamDownstreamFoodQualityD.pdf (308.37 KB)
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. 2021. “Photosynthesis From Stolen Chloroplasts Can Support Sea Slug Reproductive Fitness”. Proceedings Of The Royal Society B: Biological Sciences 288 (1959). doi:10.1098/rspb.2021.1779. https://royalsocietypublishing.org/doi/10.1098/rspb.2021.1779.
2020
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. 2020. “Effect Of Light Intensity And Light Quality On Diatom Behavioral And Physiological Photoprotection”. Frontiers In Marine Science 7: 203. doi:10.3389/fmars.2020.00203. https://www.frontiersin.org/article/10.3389/fmars.2020.00203. fmars-07-00203.pdf (3.58 MB)
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. 2020. “An Untargeted Metabolomic Approach For Microphytobenthic Biofilms In Intertidal Mudflats”. Frontiers In Marine Science 7: 250. doi:10.3389/fmars.2020.00250. https://www.frontiersin.org/article/10.3389/fmars.2020.00250. fmars-07-00250.pdf (2.41 MB)
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. 2020. “Functional Kleptoplasts Intermediate Incorporation Of Carbon And Nitrogen In Cells Of The Sacoglossa Sea Slug Elysia Viridis”. Scientific Reports 10 (1). doi:10.1038/s41598-020-66909-7. http://www.nature.com/articles/s41598-020-66909-7. s41598-020-66909-7.pdf (8.23 MB)
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. 2020. “Laminariales Host Does Impact Lipid Temperature Trajectories Of The Fungal Endophyte Paradendryphiella Salina (Sutherland.)”. Marine Drugs 18: 379. doi:10.3390/md18080379. https://www.mdpi.com/1660-3397/18/8/379. marinedrugs-18-00379.pdf (744.42 KB)
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. 2020. “Food Sources, Digestive Efficiency And Resource Allocation In The Sea Cucumber Holothuria Forskali (Echinodermata: Holothuroidea): Insights From Pigments And Fatty Acids”. Aquaculture Nutrition 26 (5): 1568-1583. doi:10.1111/anu.13103. https://onlinelibrary.wiley.com/doi/abs/10.1111/anu.13103.
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