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Hoffman, Benjamin , Maddie Cusimano, Vittorio Baglione, Daniela Canestrari, Damien Chevallier, Dominic L DeSantis, Lorène Jeantet, et al.. 2023. “A Benchmark For Computational Analysis Of Animal Behavior, Using Animal-Borne Tags”. Arxiv.
PDF icon A BENCHMARK FOR COMPUTATIONAL ANALYSIS OF ANIMAL BEHAVIOR USING ANIMAL-BORNE TAGS.pdf (11.03 MB)
Holland, Matthew M, Angus Atkinson, Mike Best, Eileen Bresnan, Michelle Devlin, Eric Goberville, Pierre Hélaouët, et al.. 2024. “Predictors Of Long-Term Variability In Ne Atlantic Plankton Communities”. Science Of The Total Environment 952: 175793. doi:10.1016/j.scitotenv.2024.175793. https://linkinghub.elsevier.com/retrieve/pii/S0048969724059497.
Holland, Matthew M, Arnaud Louchart, Luis Felipe Artigas, Clare Ostle, Angus Atkinson, Isabelle Rombouts, Carolyn A Graves, et al. 2023. “Major Declines In Ne Atlantic Plankton Contrast With More Stable Populations In The Rapidly Warming North Sea”. Science Of The Total Environment: 165505. doi:10.1016/j.scitotenv.2023.165505. https://linkinghub.elsevier.com/retrieve/pii/S0048969723041281.
Hourdez, Stéphane , Jérôme Fournier, and Pierre Chevaldonné. 2018. “Mission Polaris : Invertébrés Antarctiques Et Réchauffement Global”. Subaqua.
PDF icon Hourdez_2018.pdf (786.12 KB)
Houstin, Aymeric , Daniel Zitterbart, Alexander Winterl, Sebastian Richter, Víctor Planas-Bielsa, Damien Chevallier, André Ancel, Jérôme Fournier, Ben Fabry, and Céline Le Bohec. 2022. “Biologging Of Emperor Penguins – Attachment Techniques And Associated Deployment Performance”. Plos One. doi:10.1101/2021.06.08.446548. https://hal.archives-ouvertes.fr/hal-03409952.
PDF icon journal.pone_.0265849.pdf (1.94 MB)
Houyvet, Baptiste , Yolande Bouchon-Navaro, Claude Bouchon, Didier Goux, Benoît Bernay, Erwan Corre, and Céline Zatylny-Gaudin. 2018. “Identification Of A Moronecidin-Like Antimicrobial Peptide In The Venomous Fish Pterois Volitans: Functional And Structural Study Of Pteroicidin-Α.”. Fish And Shellfish Immunology (72): 318-324.
Houyvet, Baptiste , Yolande Bouchon-Navaro, Claude Bouchon, Erwan Corre, and Céline Zatylny-Gaudin. 2021. “Marine Transcriptomic Analysis For The Identification Of New Antimicrobial Peptides”. Marine Drugs 19 (9): 490. doi:10.3390/md19090490. https://www.mdpi.com/1660-3397/19/9/490.
Houyvet, Baptiste , Alexandre Leduc, Valérie Cornet, Julien Pontin, Benoît Bernay, Joël Henry, Emilie Vetois, and Céline Zatylny-Gaudin. 2019. “Behavior Of Antimicrobial Peptide K4 In A Marine Environment.”. Probiotics Antimicrob Proteins 11 (2): 676-686. doi:10.1007/s12602-018-9454-3.
Houyvet, Baptiste , B Zanuttini, Erwan Corre, Gildas Le Corguillé, Joël Henry, and Céline Zatylny-Gaudin. 2018. “Design Of Antimicrobial Peptides From A Cuttlefish Database.”. Amino Acids. doi:10.1007/s00726-018-2633-4.
Hubas, Cédric , Julie Gaubert-Boussarie, An-Sofie D’Hondt, Bruno Jesus, Dominique Lamy, Vona Meleder, Antoine Prins, Philippe Rosa, Willem Stock, and Koen Sabbe. 2023. “Identification Of Microbial Exopolymer Producers In Sandy And Muddy Intertidal Sediments By Compound-Specific Isotope Analysis”. Peer Community Journal 3. doi:10.24072/pcjournal.336. https://peercommunityjournal.org/articles/10.24072/pcjournal.336/.
PDF icon 10_24072_pcjournal_336 (1).pdf (3.11 MB)
Hubas, Cédric , Dominique Boeuf, Bruno Jesus, Najet Thiney, Yann Bozec, and Christian Jeanthon. 2017. “A Nanoscale Study Of Carbon And Nitrogen Fluxes In Mats Of Purple Sulfur Bacteria: Implications For Carbon Cycling At The Surface Of Coastal Sediments”. Frontiers In Microbiology 8: 1995. doi:10.3389/fmicb.2017.01995. https://www.frontiersin.org/articles/10.3389/fmicb.2017.01995/abstract.
Hubas, Cédric , Dominique Monti, Jean-Michel Mortillaro, Sylvie Augagneur, Anne Carbon, Robert Duran, Solange Karama, et al.. 2022. “Chlordecone-Contaminated Epilithic Biofilms Show Increased Adsorption Capacities”. Science Of The Total Environment 825: 153942. doi:10.1016/j.scitotenv.2022.153942. https://linkinghub.elsevier.com/retrieve/pii/S0048969722010348.
Hubas, Cédric , C Passarelli, and David M Paterson. 2018. “Microphytobenthic Biofilms: Composition And Interactions”. In Mudflat Ecology, 63–90. Cham: Springer International Publishing. doi:10.1007/978-3-319-99194-8_4. https://doi.org/10.1007/978-3-319-99194-8_4.
Hubert, Nicolas , Daniel Lumbantobing, Arni Sholihah, Hadi Dahruddin, Erwan Delrieu-Trottin, Frederic Busson, Sopian Sauri, Renny Hadiaty, and Philippe Keith. 2019. “Revisiting Species Boundaries And Distribution Ranges Of Nemacheilus Spp. (Cypriniformes: Nemacheilidae) And Rasbora Spp. (Cypriniformes: Cyprinidae) In Java, Bali And Lombok Through Dna Barcodes: Implications For Conservation In A Biodiversity Hotspot”. Conservation Genetics 20 (3): 517 - 529. doi:10.1007/s10592-019-01152-w. http://link.springer.com/10.1007/s10592-019-01152-w.
Hubert, Nicolas , Agnès Dettai, Patrice Pruvost, Corinne Cruaud, Michel Kulbicki, Robert F Myers, and Philippe Borsa. 2017. “Geography And Life History Traits Account For The Accumulation Of Cryptic Diversity Among Indo-West Pacific Coral Reef Fishes”. Marine Ecology Progress Series 583: 179–193.
Hubert, Nicolas , , A Wibowo, Frédéric Busson, D. Caruso, S. Sulandari, N Nafiqoh, et al.. 2015. “Dna Barcoding Indonesian Freshwater Fishes: Challenges And Prospects.”. Dna Barcode 3: 144-169.
PDF icon Hubert-et-al-dna-2015-0018.pdf (2.64 MB)
Hulley, Percy-Alexander , Romain Causse, Philippe Koubbi, and Marino Vacchi. 2014. “ Biogeographic Patterns Of Fish”. In The Biogeographic Atlas Of The Southern Ocean .
Hundt, Peter J, Samuel Iglesias, Andrew S Hoey, and Andrew M Simons. 2014. “A Multilocus Molecular Phylogeny Of Combtooth Blennies (Percomorpha: Blennioidei: Blenniidae): Multiple Invasions Of Intertidal Habitats.”. Mol Phylogenet Evol 70: 47-56. doi:10.1016/j.ympev.2013.09.001.
Hutama, A. , H. Darhuddin, Frédéric Busson, S Sauri, R Hanner, Philippe Keith, Renny Hadiaty, and N Hubert. 2015. “Comparative Phylogeography Of Javanese And Balinese Freshwater Fishes: Dna Barcodes Shed Light On Quaternary Range Expansion Dynamic In A Biodiversity Hotspot.”. Genome 58: 230.
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Iida, Midori , Masashi Kondo, Hélène Tabouret, Ken Maeda, C Pécheyran, Atsushi Hagiwara, Philippe Keith, and Katsunori Tachihara. 2017. “Specific Gravity And Migratory Patterns Of Amphidromous Gobioid Fish From Okinawa Island, Japan”. Journal Of Experimental Marine Biology And Ecology 486 (2017): 160-169.
Imarazen, Boudjema , Aude Andouche, Yann Bassaglia, Pascal Jean Lopez, and Laure Bonnaud-Ponticelli. 2017. “Eye Development In Sepia Officinalis Embryo: What The Uncommon Gene Expression Profiles Tell Us About Eye Evolution”. Front. Physiol.. doi:10.3389/fphys.2017.00613.
PDF icon fphys-08-00613.pdf (5.07 MB)
Inomura, Keisuke , Takako Masuda, Meri Eichner, Sophie Rabouille, Tomas Zavřel, Jan Červený, Marie Vancová, et al.. 2021. “Quantifying Cyanothece Growth Under Dic Limitation”. Computational And Structural Biotechnology Journal. doi:10.1016/j.csbj.2021.11.036. https://linkinghub.elsevier.com/retrieve/pii/S2001037021005018.
Irachi, Shotaro , Daniel J Hall, Mitchell S Fleming, Gersende Maugars, Björn Thrandur Björnsson, Sylvie Dufour, Katsuhisa Uchida, and Stephen D McCormick. 2021. “Photoperiodic Regulation Of Pituitary Thyroid-Stimulating Hormone And Brain Deiodinase In Atlantic Salmon”. Molecular And Cellular Endocrinology 519: 111056. doi:10.1016/j.mce.2020.111056. https://linkinghub.elsevier.com/retrieve/pii/S0303720720303580.
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Jaffre, Mikael , Grégory Beaugrand, Eric Goberville, Frédéric Jiguet, Nils Kjellén, Gerard Troost, Philippe J Dubois, Alain Leprêtre, and Christophe Luczak. 2013. “Long-Term Phenological Shifts In Raptor Migration And Climate”. Plos One 8.
PDF icon Jaffré et al. 2013.pdf (1.04 MB)
Janc, Anaïs , Gaëtan Richard, Christophe Guinet, John PY Arnould, Maria Ching Villanueva, Guy Duhamel, Nicolas Gasco, and Paul Tixier. 2018. “How Do Fishing Practices Influence Sperm Whale (Physeter Macrocephalus) Depredation On Demersal Longline Fisheries?”. Fisheries Research 206: 14 - 26. doi:10.1016/j.fishres.2018.04.019. https://linkinghub.elsevier.com/retrieve/pii/S0165783618301255.
Jansen, J. , M. Liem, S. Jong-Raadsen, Sylvie Dufour, Finn-Arne Weltzien, W. Swinkels, A. Koelewijn, et al. 2017. “Rapid De Novo Assembly Of The European Eel Genome From Nanopore Sequencing Reads”. Scientific Reports 7: 7213.
PDF icon Jansen_ScientificReports_2017.pdf (2.17 MB)
Jaonalison, H , JD Durand, J Mahafina, H Demarcq, Nils Teichert, and D Ponton. 2020. “Predicting Species Richness And Abundance Of Tropical Post-Larval Fish Using Machine Learning”. Marine Ecology Progress Series 645: 125 - 139. doi:10.3354/meps13385. https://www.int-res.com/abstracts/meps/v645/p125-139/.
Japaud, Aurélien , Claude Bouchon, Jean-Lou Manceau, and Cécile Fauvelot. 2015. “High Clonality In Acropora Palmata And Acropora Cervicornis Populations Of Guadeloupe, French Lesser Antilles. ”. Marine And Freshwater Research 66 (9): 847-851.
PDF icon Japaud_etal_2015.pdf (313.94 KB)
Jeanne, Fabian , Benoît Bernay, and Pascal Sourdaine. 2023. “Comparative Proteome Analysis Of Four Stages Of Spermatogenesis In The Small-Spotted Catshark (Scyliorhinus Canicula)”. Journal Of Proteome Research 22 (7): 2477 - 2492. doi:https://doi.org/10.1021/acs.jproteome.3c00206. https://pubs.acs.org/doi/10.1021/acs.jproteome.3c00206.
PDF icon Jeanroy & Denys 2019 Esox aquitanicus hybrids.pdf (4.18 MB)
Jeanson, Matthieu , Franck Dolique, and Edward J Anthony. 2019. “Decadal Scale Dynamics And Morphological Evolution Of Mangroves And Beaches In A Reef-Lagoon Complex, Mayotte Island.”. Journal Of Coastal Research SI 88.
Jeanson, Matthieu , Franck Dolique, and Edward J Anthony. 2018. “Processus Morphodynamiques Et Sédimentaires Dans Les Mangroves En Érosion De Mayotte, Océan Indien”. Vertigo (Volume 18 numéro 2). doi:10.4000/vertigo10.4000/vertigo.2039110.4000/vertigo.20531. http://journals.openedition.org/vertigo.
Jeanson, Matthieu , Franck Dolique, and Edward J Anthony. 2011. “Un Réseau De Surveillance Des Littoraux Face Au Changement Climatique En Milieu Insulaire Tropical : L’exemple De Mayotte”. Vertigo (Volume 10 Numéro 3). doi:10.4000/vertigo10.4000/vertigo.1047110.4000/vertigo.10512. http://vertigo.revues.org.
Jeantet, Lorène , Vadym Hadetskyi, Vincent Vigon, François Korysko, Nicolas Paranthoen, and Damien Chevallier. 2022. “Estimation Of The Maternal Investment Of Sea Turtles By Automatic Identification Of Nesting Behavior And Number Of Eggs Laid From A Tri-Axial Accelerometer”. Animals 12 (4): 520. doi:10.3390/ani12040520. https://www.mdpi.com/2076-2615/12/4/520.
Jeantet, Lorène , Vincent Vigon, Sébastien Geiger, and Damien Chevallier. 2021. “Fully Convolutional Neural Network: A Solution To Infer Animal Behaviours From Multi-Sensor Data”. Ecological Modelling 450: 109555. doi:10.1016/j.ecolmodel.2021.109555. https://linkinghub.elsevier.com/retrieve/pii/S0304380021001253.
Jeantet, Lorène , Víctor Planas-Bielsa, Simon Benhamou, Sébastien Geiger, Jordan Martin, Flora Siegwalt, Pierre Lelong, et al.. 2020. “Behavioural Inference From Signal Processing Using Animal-Borne Multi-Sensor Loggers: A Novel Solution To Extend The Knowledge Of Sea Turtle Ecology”. Royal Society Open Science 7 (5): 200139. doi:10.1098/rsos.200139. https://royalsocietypublishing.org/doi/10.1098/rsos.200139.
Jeantet, L. , F. Dell'Amico, M. A Forin-Wiart, M. Coutant, M. Bonola, D. Etienne, J. Gresser, et al. 2018. “Combined Use Of Two Supervised Learning Algorithms To Model Sea Turtle Behaviours From Tri-Axial Acceleration Data”. Journal Of Experimental Biology. doi:10.1242/jeb.177378. https://journals.biologists.com/jeb/article/doi/10.1242/jeb.177378/262989/Combined-use-of-two-supervised-learning-algorithms.
Jeng, Shan-Ru , Guan-Chung Wu, Wen-Shiun Yueh, S-F Kuo, Sylvie Dufour, and Ching-Fong Chang. 2019. “Dmrt1 (Doublesex And Mab-3-Related Transcription Factor 1) Expression During Gonadal Development And Spermatogenesis In The Japanese Eel.”. General And Comparative Endocrinology 279: 154-163.
Jeng, Shan-Ru , Guan-Chung Wu, Wen-Shiun Yueh, Pei-hua Liu, Shu-Fen Kuo, Sylvie Dufour, and Ching-Fong Chang. 2024. “The Expression Profiles Of Cyp19A1, Sf-1, Esrs And Gths In The Brain-Pituitary During Gonadal Sex Differentiation In Juvenile Japanese Eels”. General And Comparative Endocrinology 353: 114512. doi:10.1016/j.ygcen.2024.114512.
Jeng, Shan-Ru , Wen-Shiun Yueh, Yi-Ting Pen, Yan-Horn Lee, Guan-Ru Chen, Sylvie Dufour, and Ching-Fong Chang. 2014. “Neuroendocrine Gene Expression Reveals A Decrease In Dopamine D2B Receptor With No Changes In Gnrh System During Prepubertal Metamorphosis Of Silvering In Wild Japanese Eel.”. Gen Comp Endocrinol 206: 8-15. doi:10.1016/j.ygcen.2014.08.001.
PDF icon Jeng_GCE_2014.pdf (2.21 MB)
Jeng, Shan-Ru , Peter Thomas, Yefei Pang, Sylvie Dufour, Chien-Ju Lin, Wen-Shiun Yueh, and Ching-Fong Chang. 2020. “Elevated Estradiol-17Β Levels Inhibit Final Oocyte Maturation Via G Protein-Coupled Estrogen Receptor (Gper) In Yellowfin Porgy, Acanthopagrus Latus”. General And Comparative Endocrinology 299: 113587. doi:10.1016/j.ygcen.2020.113587. https://linkinghub.elsevier.com/retrieve/pii/S0016648020303403.
Jenouvrier, Stéphanie , Clara Péron, and H. Weimerskirch. 2015. “Extreme Climate Events And Individual Heterogeneity Shape Life-History Traits And Population Dynamics”. Ecological Monographs 85: 605–624. doi:https://doi.org/10.1890/14-1834.1. https://esajournals.onlinelibrary.wiley.com/doi/full/10.1890/14-1834.1.
Jézéquel, Céline , Pablo A Tedesco, Remy Bigorne, Javier A Maldonado-Ocampo, Hernan Ortega, Max Hidalgo, Koen Martens, et al.. 2020. “A Database Of Freshwater Fish Species Of The Amazon Basin”. Scientific Data 7: 1–9. https://www.nature.com/articles/s41597-020-0436-4.
Jézéquel, Youenn , Delphine Mathias, Frédéric Olivier, Erwan Amice, Sylvain Chauvaud, Aurélie Jolivet, Julien Bonnel, Mikael K Sejr, and Laurent Chauvaud. 2022. “Passive Acoustics Suggest Two Different Feeding Mechanisms In The Atlantic Walrus (Odobenus Rosmarus Rosmarus)”. Polar Biology. doi:10.1007/s00300-022-03055-y. https://link.springer.com/10.1007/s00300-022-03055-y.
Jiguet, Frédéric , Damien Chevallier, François Baillon, Julien Ventroux, and Pascal Cavallin. 2012. “Sub-Saharan Staging Areas Of A First-Summer Short-Toed Snake Eagle Circaetus Gallicus”. Bird Study 59 (1): 102 - 104. doi:10.1080/00063657.2011.648607. http://www.tandfonline.com/doi/abs/10.1080/00063657.2011.648607.
Jiguet, Frédéric , Morgane Barbet-Massin, and Damien Chevallier. 2011. “Predictive Distribution Models Applied To Satellite Tracks: Modelling The Western African Winter Range Of European Migrant Black Storks Ciconia Nigra”. Journal Of Ornithology 152 (1): 111 - 118. doi:10.1007/s10336-010-0555-3. http://link.springer.com/10.1007/s10336-010-0555-3.
Jolivet, Aurélie , Réjean Tremblay, Frédéric Olivier, Cédric Gervaise, Rémi Sonier, Bertrand Genard, and Laurent Chauvaud. 2016. “Validation Of Trophic And Anthropic Underwater Noise As Settlement Trigger In Blue Mussels”. Scientific Reports 6: 33829.
PDF icon srep33829.pdf (438.8 KB)
Jolly, C , Karine Rousseau, L Prézeau, C Vol, J Tomkiewicz, Sylvie Dufour, and C Pasqualini. 2016. “Functional Characterization Of Eel Dopamine D2 Receptors And Involvement In The Direct Inhibition Of Pituitary Gonadotropins.”. J Neuroendocrinol. doi:10.1111/jne.12411.
PDF icon Jolly_jne_12411_Rev_EV.PDF (637.36 KB)